University of Birmingham eData Repository (UBIRA E-Data)
Not a member yet
663 research outputs found
Sort by
Coulomb crystallization of xenon highly charged ions in a laser-cooled Ca+ matrix
raw data for Fig.
Research data supporting the publication: Heterogeneity within Phycobilisomes is Highly Orchestrated
Mass spectrometry raw data files and purification traces to support the publication: Heterogeneity within Phycobilisomes is Highly Orchestrated.
Abstract: The phycobilisome (PBS) is one of the oldest and most efficient light-harvesting protein complexes known. Throughout billions of years of evolution, the PBS has readily adapted to its environment through differential gene expression alongside controlled assembly/disassembly of its components. How hundreds of protein subunits assemble in a controlled manner into different PBS structures within different cyanobacterial species is unknown. Moreover, PBSs are not static entities, and can have different compositions that enables them to modulate their overall function in response to changes in their environment. Here, we utilised high resolving native mass spectrometry (MS) to probe the heterogeneity within PBSs and determine factors that govern its self-assembly. By monitoring PBSs stable sub-complexes, we were able to detect low abundant allophycocyanin variants ApcD and ApcF, in addition to the core linker protein ApcC, and determine their complex stoichiometry. Furthermore, native MS revealed the phycobiliproteins, phycocyanin and allophycocyanin, are unable to form mixed rings within the PBS structure, and instead can only stack, one on of top of another, for efficient energy transfer. Finally, we show that in strains such as A. marina where no allophycocyanin core is present, phycocyanin variants acts as distinct entities to ensure highly orchestrated PBS assembly. Together, the methodology and data obtained open up new avenues for future exploration into how the PBS adapts for effective function
Rapid prediction of electrolyte-based cell failure in retired Li-ion Electric Vehicle pouch cells
1. Cycling_Discharge-Capacities_CP1-and-CP2
2. EIS dataset CP1 at various SOCs (100, 80, 60, 40, 20%)
3. EIS dataset CP2 at various SOCs (100, 80, 60, 40, 20%
Data to accompany "Integrated native mass spectrometry imaging of soluble and membrane proteins"
Mass spectrometry data to accompany "Integrated native mass spectrometry imaging of soluble and membrane proteins" including mass spectra, mass spectrometry imaging data, and tandem mass spectr
Data for "Interactions and Reconnections of Four-Dimensional Quantum Vortices"
Example fortran code, and example dataset for the publication "Interactions and Reconnections of Four-Dimensional Quantum Vortices
Data and supplementary information supporting "The HBIM Maturity Model: Accrediting historic building information modelling (HBIM) development".
File 1 (HBIM Maturity Model) - The file details the HBIM Maturity Model, a level-based maturity model for the implementation and evaluation of HBIM systems against end user requirements. The file also contains an assessment tool for HBIM system evaluation.
File 2 (case study evaluation and credit achievement) - supporting data for the paper ' The HBIM Maturity Model: Accrediting historic building information modelling (HBIM) development'. File contains evaluation of HBIM case studies (2023-2025) against end user requirements. The file also details the credit assignment process for the HBIM Maturity Model
Research data supporting the publication "On the Learnability of Aspectual Usage"
The data were collected as part of the PhD thesis of the third co-author, Dr. Maciej Borowski. The 77 participants completed an online two-alternative forced-choice (2AFC) gap-filling task comprising 60 items, administered via the Qualtrics platform
Research data supporting the publication "Switching On Supramolecular DNA Junction Binding Using a Human Enzyme"
Raw data set for compound characterization, ESI-MS kinetics, biophysical experiment (Gel, Melting, CD & LD), MTT assay, ICP-MS data for cell accumulation, MD simulatio
Research software supporting the publication “Leveraging Large Language Models to Classify and Inspect Defects in Reinforced Autoclaved Aerated Concrete (RAAC)”
This deposit contains the full Python code for the LLM-based approach described in “Leveraging Large Language Models to Classify and Inspect Defects in Reinforced Autoclaved Aerated Concrete (RAAC).” It includes six scripts: two parallel prompt modules for RAAC mention detection and definition extraction; a seven-question defect-extraction script; and a data-aggregation script that produces a unified defect database. All scripts are versioned for reproducibility and require Python 3.11+, the Anthropic Claude 3 Opus API, and standard data-analysis libraries.
A comprehensive README.md is included, detailing environment setup, dependency installation, API key configuration, and step-by-step execution instructions. The code is mirrored on GitHub for ongoing collaboration and version tracking. An interactive project overview and navigation interface is also provided via index.html on the project’s GitHub Pages site
Research data supporting the publication "Has UK Capitalism Transformed? Reassessing Surplus-Value Distribution and Unproductive Labour"
We introduce an ‘Economic Productive Labour Classification System’, which distinguishes unproductive (UL) from productive labour (PL), combining ONS macroeconomic data and socioeconomic micro-datasets. This enables the first detailed estimation of the surplus-value (SV) rate and labour exploitation for the UK