2875 research outputs found
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Aggregate_builder_constant_population
No full textAggregate Builder constant population -- uses a MC algorithm to select colliding pair based on the collision probability of all possible pairs. Chooses an elapsed time interval for each collision
Temperature-dependent effects of house fly proto-Y chromosomes on gene expression
No full textCode, commands, and data to perform analyses of house fly RNA-seq data. House fly has a stable polygenic sex determination system. The male determining factor (Mdmd) is commonly found on the Y chromosome (Y^M) or the third chromosome (III^M). These proto-Y chromosomes are clinally distributed, with Y^M found most commonly in northern latitudes and III^M most commonly found at southern latitudes, hinting at possible genotype-by-temperature interactions that maintain the polymorphism. If this distribution is maintained by temperature-dependent selection pressures, we expect the fitness of III^M and Y^M flies to vary across developmental temperatures. These temperature-dependent effects could be driven by differential gene expression in III^M and Y^M males at different temperatures. Here, we performed RNA-seq experiments to study how genotype-by-temperature interactions affect gene expression in male houseflies carrying different proto-Y chromosomes. We raised a Y^M strain known as IsoCS and a III^M strain known as CSrab at 18°C and 29°C for two generations. We dissected 5 heads and 15-20 pairs of testes for each of three replicates of each genotype-by-temperature combination. We carried out RNA-seq on these tissues. Data are available from NCBI Gene Expression Omnibus accession GSE136188
Current Joint Therapy
No full textSurvey data from AAEP members reflecting the current joint therapy in horses
SNP and Annotation Data for Switchgrass genome paper
No full textSNP data used for genome-wide association in the switchgrass genome paper. SNP data includes five sets of three SNP files (with the same filename, and .bed, .bim, and .fam file extensions), and two annotation data files
Theodor de Bry's America (Legacy Metadata Only)
No full textPre-work collection metadata for Theodore De Bry's Americae, pars quarta
Replication Data for: Antimicrobial activity of treatments on spinach leaf surfaces evaluating prevention of pathogens during multi-contamination events.
No full textThe data set contains experimental treatment parameters and resulting log-transformed microbiological data for all published data. The data are arranged in JMP-ready datalines, useful for importing and analysis within the statistical analysis package JMP (SAS Institute, Inc.)
Timon of Athens (both)
No full textData for both the Shakespearean and non-Shakespearean portions of Timon of Athen
Replication Data for: The Native Bees of Texas: Evaluating the Benefits of a Public Engagement Course
No full textData supporting reported results generated during the study “The Native Bees of Texas: Evaluating the Benefits of a Public Engagement Course” published in the MDPI journal Insects
Titus Andronicus (both)
No full textData for both the Shakespearean and non-Shakespearean portions of Titus Andronicu