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A conserved trans regulatory loop involving an odorant binding protein controls male mating behavior in flies
No full textCode and data to perform analyses of house fly RNA-seq and behavioral data. The house fly, Musca domestica, is a promising system to investigate different hypotheses that explain how genetic variation is maintained in sexually selected traits. Two common Y chromosomes (YM and IIIM) segregate as stable polymorphisms in natural house fly populations, appear to be locally adapted to different thermal habitats, and differentially affect male mating success. To identify candidate genetic mechanisms implicated in the maintenance of the behavioral polymorphism, we performed a meta-analysis of RNA-seq data to identify differences in gene expression between the heads of males carrying the YM and IIIM chromosomes. We also conducted single-choice and competitive mating assays to characterize the effects of genotype and developmental temperature on male house fly mating behavior
Supplemental Files 4
No full textThis data set contains example images (+ processed) images to test the DIC pipeline
Corpus of African Digital News from 600 Websites Formatted for Text Mining / Computational Text Analysis
No full textThis dataset includes a corpus 200,000+ news articles published by 600 African news organizations between December 4, 2020 and January 3, 2021. The texts have been pre-processed (punctuation and English stopwords have been removed, features have been lowercased, lemmatized and POS-tagged) and stored in commonly used formats for text mining/computational text analysis. Users are advised to read the documentation for an explanation of the data collection process.
This dataset includes the following items:
31 tables (one per day) of lowercased and lemmatized tokens with the following additional variables: POS tags, document id, sentence id, token id and publication date (stored as a tibble).
A single document-feature matrix (DFM) with raw counts of feature frequencies in each news article (stored as a quanteda dfm object). The DFM comes with the following metadata for each document: date of publication and source URL.
A metadata table with the following fields: document id, publication date, source url, news source and country of the news source.
A list of sources included in the course grouped by country name.
All items are stored in formats readable in R. The documentation provides instructions on how to load the RDS files to R.
If you decide to use the data for your own project, please do cite it using the information above. If you identify errors or missing sources, please contact us so that these can be addressed
Replication Data for: Effect of subsurface soil moisture variability and atmospheric conditions on methane gas migration in shallow subsurface
No full textReplication Data for: Effect of subsurface soil moisture variability and atmospheric conditions on methane gas migration in shallow subsurfac
Replication Data for Stucky de Quay et al. (2021) in GRL
No full textData used to calculate runoff timescales from climate in the [GRL] article titled "Limits on runoff episode duration for early Mars: integrating climate models and lake hydrology" by Stucky de Quay et al. (2021)
Ratings Summary Matlab Scripts
No full textThese are the Matlab scripts to perform basic face rating summaries + auxiliary analyses.
These files are associated with the following published study: Trujillo & Anderson (in press). Facial typicality and attractiveness reflect an ideal dimension of face structure. Cognitive Psychology. https://doi.org/10.1016/j.cogpsych.2022.101541. Please properly cite all usage of the files.
All version changes to date (12/22/2022) reflect uploading of new files created for revised analyses as part of the peer review of the associated manuscript
