Indian Institute of Science Bangalore

etd@IISc Electronic Theses and Dissertations at Indian Institute of Science
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    6204 research outputs found

    Electron Microscopy Investigations of Surface-modulated Nanomaterials for Electrocatalytic Applications

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    With advancement and increasing usage of technologies, the demand for energy is also growing. However, the limited and ever-depleting stock of natural gas and fossil fuels has necessitated for better solutions in energy generation, conversion, and storage. To address the upcoming energy crisis, research on alternative energy conversion and storage applications has become an active field of interest. One of the most explored fields among them is electrocatalytic energy conversion reactions involving nanomaterials, which are interesting owing to their high activity originating from increased surface to volume ratio compared to the bulk counterpart. In recent literature, electrocatalysis has been employed for a variety of reactions like alcohol oxidation and water splitting. The activity of any catalyst depends on the surface /sub-surface atomic configuration, their electronic structure, and adsorption/ desorption energy of intermediates. Changing the composition of surface and sub-surface leads to change the adsorption and desorption energy of the intermediates on surface. The activity of any catalyst is tuned by surface modifications as and whenever required and their surface modifications lead to improvement in the corresponding property. Noble metal catalysts are well known in literature and were explored for different types of electrocatalysis. In this thesis, nanomaterial-based catalysts based on ultrathin Au nanowires as a template, are explored and their activities were investigated after their surface modifications. Extensive electron microscopic investigations were carried out using scanning transmission electron microscopy as a tool to understand the surface and sub-surface structure and composition at atomic scale. In some scenarios, high-angle annular dark field (HAADF)-STEM imaging can be limited by close atomic numbers of the constituent elements. There, other complementary techniques like XPS have been used to understand the composition. The synthesized templated catalysts have been tested for various reactions like electrocatalytic alcohol oxidations and water splitting reactions

    Investigating the role of an atypical dual-specificity phosphatase DUSP28 in mammalian cells

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    Dual-specificity phosphatases (DUSPs) belong to the protein tyrosine phosphatases (PTP) subfamily and dephosphorylate, both serine/threonine and tyrosine residues of proteins and non-protein substrates. A subgroup of DUSPs called ‘atypical’ are associated with cellular processes such as apoptosis and proliferation. Atypical DUSPs share a high degree of similarity with the MKP (mitogen-activated protein kinase) phosphatase subfamily but lack the N-terminal regulatory domain responsible for substrate specificity. Therefore, the atypical-DUSPs possess a single catalytic PTP domain. Recent approaches show that atypical DUSPs are differentially expressed in various cancers. A member of this family is DUSP28, whose biological function remains unexplored. The level of expression (mRNA and protein) of DUSP28 has been shown to be elevated in hepatocellular carcinoma (HCC), pancreatic and breast cancers. Further, its expression has been shown to increase migration, invasion, and viability through the activation of CREB, AKT, and ERK1/2 signaling pathways in pancreatic and breast cancers. DUSP28 also modulates the cell cycle in HCC by arresting the cells in the S phase with a concomitant decrease in G1 phase cells. In this study, we have endeavoured to characterize the localization, function, substrate recognition, and pathways associated with DUSP28 in HeLa cells

    Experimental and numerical study of mechanics and mechanisms of mode I fracture of a textured magnesium alloy

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    In recent years, magnesium alloys have gained increasing application in the automotive industry to achieve weight reduction in vehicle components which is crucial for enhancing fuel efficiency and meeting stringent emission requirements. However, it is of primary importance to understand the mechanics and mechanisms of fracture of these alloys since their toughness can be lower than aluminium alloys. Thus, the specific objectives of this thesis are to study the three-dimensional nature of notch tip fields, mechanics of ductile fracture and effects of temperature and loading rate on mode I fracture behaviour of basal-textured magnesium alloys. Crystal plasticity-based finite element (CPFE) analyses are first performed to analyse the 3D nature of stationary mode I notch tip fields in a four-point bend specimen of a basal-textured magnesium alloy. Two notch orientations (TD-RD and ND-TD) are considered along with the isotropic von Mises material model to bring out the effect of anisotropy exhibited by this alloy. The simulation results agree well with a complimentary experimental study conducted pertaining to the TD-RD orientation. Also, they provide unique insights on the near-tip radial and thickness variations of stresses and plastic variables like slips and twin volume fraction for the two orientations. The mechanics of ductile fracture near a notch tip is investigated through CPFE simulations of an array of circular voids ahead of the notch tip subjected to mode I loading. The two notch orientations, as described above, along with the von Mises material model are considered here as well. It is found that the void growth mechanism depends strongly on notch orientation and initial porosity level. In particular, high hardening triggered by tensile twinning and pyramidal slip retards void growth and enhances the crack growth resistance for the ND-TD orientation. The effect of temperature and loading rate on mode I fracture in a rolled AZ31 Mg alloy, having a near-basal texture, is studied through carefully designed experiments. The high temperature experiments are conducted in the temperature range of 25 to 100 deg C using four-point bend specimens. The experiments at different loading impact speeds (ranging from 9 to 20 m/s) are performed with three-point bend specimens using a Hopkinson pressure bar. In both sets of experiments, in-situ optical images are acquired which are analysed by DIC to map out the displacement and strain fields. Microstructural analysis reveals that the fracture mechanism changes from twin-induced quasi-brittle cracking to ductile void growth and coalescence as temperature is raised from 65 to 100 deg C or as the loading changes from static to dynamic resulting in strong enhancement in the fracture toughness. This corroborates with the decrease in tensile twinning near the tip with loading rate or temperature. Simplified analyses are performed to rationalize the experimental results

    Identification of crystalline structures of clathrate hydrates during molecular simulations using machine learning

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    Molecular simulation is a powerful tool that links a system’s microscopic behaviour to its macroscopic observable features. The data obtained from a molecular simulation act as a digital microscope, i.e., it contains information about the positions and velocities of all the atoms. This data contains all the necessary information to extract the local structure of the system being studied. However, it is necessary to develop additional tools in order to extract such useful information about system behaviour from this massive amount of simulation data. In this thesis, I present a general method for identification of crystalline structures within any system during a molecular simulation. The method presented here combines the information provided by order parameters quantifying crystalline environments with a suitable Machine Learning algorithm. The developed method is then successfully applied towards identifying crystalline structures of gas hydrates

    Spectroscopic study of emitter assemblies coupled to Plasmonic nano-cavities and metamaterials

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    The plasma oscillations of noble metals as silver and gold are well understood from the free electron model of metals. In the past two decades, due to the availability of various physical and chemical fabrication methods for nano materials, the optical properties of nanostructures of noble metals gained interest. The plasma oscillations of the noble metal nanostructures have unique optical properties. The free electrons are confined by the geometry of nanostructure and give rise to spatially localized plasma oscillations. Various modes of the electrostatic multi-pole potential problem can be realized in such metal nanostructures. The localized dipolar plasma modes can be coupled to various light emitters, by placing the emitters, near these noble metal nanostructures. In this study, various aspects of interaction emitters coupled to silver nanostructures are explored. The spontaneous emission properties of alloyed quantum dot films is discussed. The quantum dot monolayer samples are used for measuring angle resolved emission pattern, using a home-built angle resolved emission spectroscopy (ARES) system operating in both transmission and reflection modes. The ARES system is bench marked and photoluminescence (PL) emission anisotropy is quantified as anisotropy coefficient. The anisotropy coefficient indicates the orientation of emission transition dipole moment (TDM) relative to the substrate. The time resolved PL emission measurement is used to estimate the TDM magnitude. The spontaneous emission properties of quantum dots coupled to silver nanoplatelets and silver nanowires are discussed. The nanowire and nanoplatelet cavity modes are in infrared region and quantum dot emission is in visible region of electromagnetic spectrum. Due to off-resonant weak coupling between quantum dots and silver nanowires/silver nanoplatelets lead to inhibition of the spontaneous emission rate. The spontaneous emission rate inhibition is measured in terms of Purcell factors less than unity. The emitter-cavity interaction is in weak coupling regime, as indicated by the Purcell inhibition of spontaneous emission. The hyperbolic metamaterial (HMM) is introduced as an ordered hexagonal array of silver nanowires in an Aluminium oxide dielectric host. The HMM undergoes an optical topological transition and can support large number of cavity modes, which are the Bloch modes of the nanowire plasma resonances. It is shown that the Purcell enhancement of spontaneous emission on HMM is at least 4.6 fold. The vertically oriented nanowire array is optimally oriented for coupling the in-plane oriented excitons. Monolayer MoS2 is an ideal emitter to couple with HMM as its A and B excitons have unusually large TDMs. Rabi splitting is observed for B excitons, whose position is nearly resonant with the transition set-in point. The avoided crossing of strongly coupled Exciton-Polariton states is demonstrated. The A excitons do not show Rabi splitting. This selective strong coupling of B excitons is attributed to the inbuilt electrical field gradient of the HMM topological transition

    Investigating spin transport across magnetic insulators and their interfaces

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    Spin transport across magnetic insulator/heavy metal (MI/HM) interfaces has been a topic of interest in spintronics. The spin Seebeck effect (SSE) and spin Hall magnetoresistance (SMR) are two phenomena that have garnered much attention. The SSE studies magnon spin current induced by thermal effects, while SMR investigates the change in HM resistivity due to spin transfer torque at the MI/HM interface. This thesis investigates the use of electrical insulating magnetic materials for spin information transmission at room temperature, with a focus on understanding spin transport phenomena across magnetic insulators and their interfaces. The first part of the thesis presents the work on detecting spin-Hall magnetoresistance (SMR) on a crystalline b-plate of Ho0.5Dy0.5FeO3 (HDFO)/Pt hybrid. The SMR measurements were conducted at various temperatures, ranging from 11 to 300 K. The first set of experiments focused on measuring the angular dependence of SMR at room temperature under fields above and below the critical field, revealing anomalies in the signal. These anomalies were then explained through the simulation of the SMR signal using a simple Hamiltonian model. Further analysis of SMR measurements was conducted under a constant field above the critical field at different temperatures, and the results were discussed. The second part of the thesis describes research on the measurement of SMR and SSE on a polycrystalline Sr3Co2Fe24O41 (SCFO)/Pt heterostructure, a room-temperature magneto-electric multiferroic material. The amplitude of SMR data obtained from two measurement sets shows a non-monotonic behaviour with a sign reversal from negative to positive as the external magnetic field is varied. The observed SMR data in SCFO is analysed using a simple Hamiltonian model. Additionally, longitudinal SSE measurements are performed, which resemble the dc magnetization results at 300 K. In the last part, spin transport (SMR and SSE) was investigated on trilayer devices consisting of MgO/Ni0.8Zn0.2Fe2O4 (NZFO)/NiO/Pt heterostructures with varying NiO thicknesses. SMR (1ω) measurements were conducted at various temperatures, followed by current-induced heating to detect 2ω signal. The lock-in detection technique was used to measure 2ω signals by varying magnetic field, current, and temperature that shows non-sinusoidal SSE signal. This non-sinusoidal SSE signal was attributed to unidirectional anisotropy (UDA), caused by ferrimagnetic/antiferromagnetic exchange coupling, using a simple Hamiltonian model. Overall, this thesis contributes to the advancement of spintronic research by exploring the potential of electrical insulating magnetic materials as carriers of spin information and developing a simple Hamiltonian model for analysing spin-related phenomena in these materials

    Tropical Teleconnections to the Indian Summer Monsoon in Observations and in a Coupled Model

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    An accurate seasonal prediction of Indian summer monsoon rainfall (ISMR) holds immense importance for the socio-economic well-being of South-Asian countries, as it directly impacts agricultural output and overall economies. The interannual variability of ISMR is strongly associated with climatic events occurring in various ocean basins, particularly the eastern and central Pacific oceans. However, despite this association, accurately predicting ISMR with a lead time of one season remains a challenging task. While there exist several theories on ISMR teleconnections, they differ significantly in their approaches. Hence, gaining insights into the role of global climatic patterns through a unified physical mechanism is crucial to improve ISMR prediction. Therefore, in this study, we investigate the physical processes that connect major climatic events with the Indian summer monsoon through a single physical mechanism by utilizing both observations and climate model simulations. By employing moisture budget theory, we highlight the crucial role of surface pressure modulation in controlling the ISMR variability, which is difficult to simulate accurately using numerical prediction models. In the first part, we proposed a unified teleconnection framework that links tropical teleconnections to ISMR through the net moisture convergence driven by surface pressure () gradients surrounding the Indian region. The positive and negative phases of major tropical climate patterns modulate these pressure gradients asymmetrically in the zonal and/or meridional directions leading to asymmetric changes in moisture convergence and ISM rainfall. Stronger El Nino droughts than La Nina floods are due to greater decreased eastward moisture flux over the Arabian Sea during El Nino than the corresponding increase during La Nina driven by proportionate meridional gradients. While the equatorial Atlantic Ocean’s sea surface temperature in boreal summer and El Nino Southern Oscillation (ENSO) in the preceding winter changes ISMR significantly, moisture convergence anomalies driven by the Indian Ocean Dipole were insignificant. Moreover, while ISMR extremes during ENSO are due to asymmetric changes in zonal and meridional gradients in , non-ENSO ISMR extremes arise due to the zonal gradient in zonally symmetric anomalies. In the second part, we employ the previously proposed theory to examine the underlying physical processes that contribute to the occurrence of ISMR seasonal droughts in both observation and Climate Forecast System version 2 (CFSv2) model. In observations, a reduction in incoming zonal moisture flux over the Arabian Sea ( ) is essential for droughts to occur. In addition, an increase in outgoing flux over the Bay of Bengal () results in a severe drought. On the contrary, droughts in CFSv2 primarily occur due to an enhancement in , seldom accompanied by a decrease in . This hypersensitivity of the CFSv2 ISMR to is further explained using the Matsuno-Gill response to moist convection. During El Nino droughts, precipitation decreases over the equatorial western Pacific and eastern Indian Oceans. The resulting anomalous diabatic cooling increases local surface pressure (), intensifying meridional gradient, and thus, . The reduction in , however, is associated with a cooling of the central north Pacific Ocean in tandem with El Nino. During non-El Nino droughts, frequent occurrences of cold sea surface temperatures over the western north Pacific Ocean are noticed. This cooling decreases over east Asia, increasing . To summarize, droughts in CFSv2 are controlled by the pan-Pacific climate but weakly decreasing . But in observations, a strong decrease in and a moderate increase in together lead to droughts. Numerous previous studies have consistently highlighted that most climate models tend to overestimate the relationship between ENSO and ISMR. However, in the final part of this thesis, we argue that this strong relationship is not an inherent characteristic of the CFSv2 model but rather stems from the methodology employed to calculate the ensemble mean. The dominance of the ENSO-ISMR relationship in the ensemble mean results from a higher occurrence of ensemble members having the same sign of an anomaly. However, for non-ENSO forcing, the limited number of ensemble members with coherent anomalies leads to a diminished impact and inadequate ISMR response in the ensemble mean. This study highlights the limitations of relying solely on the ensemble mean for analyzing model characteristics and making forecasts. By exclusively focusing on the ensemble mean, there is a risk of making incorrect assessments of the model’s teleconnection patterns. This thesis presents a comprehensive physical theory that connects tropical teleconnections and the Indian summer monsoon through the net moisture convergence driven by gradients around the Indian region. We have demonstrated the utility of this theory in analyzing the characteristics of climate models, which serves as a yardstick for enhancing the performance of dynamic models used for seasonal prediction

    Design and Analysis of Random Access Protocols for Massive Machine-Type Communications

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    Massive machine-type communications (mMTC) is a 5G and beyond use case, where the network is expected to serve millions of devices per square kilometre. Typical mMTC devices include smart energy meters, pressure sensors, temperature indicators, smart factory equipment, etc. These devices sporadically transmit short packets, i.e., they transmit a short burst of data once in a while and then largely remain inactive. In order to serve mMTC scenarios, we need to use grant-free random access (GFRA) protocols since they have the advantage of a low control and signalling overhead as well as non-orthogonal use of the channel. GFRA for mMTC is a relatively new research topic and has received immense interest in the recent past. In this thesis, we analyze several practical aspects of irregular repetition slotted aloha (IRSA), which is a GFRA protocol for mMTC. IRSA is a distributed GFRA protocol where users transmit multiple replicas of their packets in randomly selected resource blocks within a frame to a base station (BS). The BS recovers the packets using successive interference cancellation (SIC). Existing studies have analyzed IRSA with idealized assumptions, i.e., neglecting fading, path-loss, channel estimation errors, pilot contamination, multi-cell interference, etc. These non-idealities can greatly reduce the performance of the system and must be accounted for in the design and analysis of any mMTC system. In this thesis, we first analyze channel estimation in IRSA, exploiting the sparsity structure of IRSA transmissions, when non-orthogonal pilots are employed across users to facilitate channel estimation at the BS. Allowing for the use of non-orthogonal pilots is important, as the length of orthogonal pilots scales linearly with the total number of devices, leading to prohibitive overhead as the number of devices increases. Next, we present a novel analysis of the throughput of IRSA under practical channel estimation errors, and with the use of multiple antennas at the BS. Finally, we theoretically characterize the asymptotic throughput of IRSA using a density evolution based analysis. Simulation results underline the importance of accounting for channel estimation errors in analyzing IRSA, which can even lead to 70% loss in performance in severely interference-limited regimes. We also provide novel insights on the effect of parameters such as pilot length, SNR, number of antennas at the BS, etc, on the system throughput. Next, we develop a novel Bayesian user activity detection (UAD) algorithm for IRSA, which exploits both the sparsity in user activity as well as the underlying structure of IRSA transmissions. We then derive the Cramer-Rao bound (CRB) on the mean squared error in channel estimation. We empirically show that the channel estimates obtained as a by-product of the proposed UAD algorithm achieves the CRB. Then, we analyze the signal to interference plus noise ratio achieved by the users, accounting for UAD, channel estimation errors, and pilot contamination. Finally, we illustrate the impact of these non-idealities on the throughput of IRSA via Monte Carlo simulations. For example, in a system with 1500 users and 10% of the users being active per frame, a pilot length of as low as 20 symbols is sufficient for accurate user activity detection. In contrast, using classical compressed sensing approaches for UAD would require a pilot length of about 346 symbols. Our results reveal crucial insights into dependence of UAD errors and throughput on parameters such as the length of the pilot sequence, the number of antennas at the BS, the number of users, and the SNR. Then, we develop an enhanced version of IRSA that can be operated at the peak performance even at high system loads. IRSA can be used to serve a large number of users in mMTC while achieving a near-zero packet loss rate (PLR). However, in overloaded mMTC scenarios, the system is interference-limited, and the PLR is close to one. We develop a variant of IRSA in the interference limited-regime, namely Censored-IRSA (C-IRSA), in which users with poor channel states self-censor, i.e., they refrain from transmitting their packets. This censoring depends on a censor threshold that can be varied depending on the number of users in the system. Firstly, we empirically and theoretically analyze the performance of C-IRSA. Next, we derive the optimal choice of the censor threshold via a semi-analytic approach and a PLR-optimal algorithmic approach. This choice of the threshold maximizes the throughput while achieving zero PLR among uncensored users. Through extensive numerical simulations, we show that C-IRSA operates at full system throughput at high system loads compared to vanilla IRSA which has near-zero throughput. After this, we analyze IRSA in the multi-cell (MC) and cell-free (CF) setups, accounting for pilot contamination, channel estimation errors, and multi-user interference. Via extensive simulations, we illustrate that, in practical settings, MC IRSA can have a drastic loss of throughput, up to 70%, compared to SC IRSA. Further, MC IRSA requires a significantly higher training length, in order to support the same user density and achieve the same throughput: for example, MC IRSA may need about 4−5x compared to SC IRSA. We provide insights into the effect of system parameters such as number of antennas, pilot length, and SNR on the throughput of MC IRSA and CF IRSA. With the proposed CF architectures, we show that we can achieve more than 14x improvement in the throughput of CF IRSA compared to a massive MIMO SC setup. We also study the densification trends in MC IRSA, where we observe an inverse behaviour in the throughput compared to CF IRSA. Finally, we optimize the repetition distributions in IRSA with the throughput and the energy efficiency objectives. Via extensive numerical simulations, we study the effect of various system parameters such as the maximum repetition factor, the average repetition factor, the number of antennas, and the pilot length, on the repetition distributions, the inflection load, and the peak energy efficiency. Compared to the best existing distributions, we show that our optimized distributions can achieve up to 58% increase in the inflection load and up to 49% increase in the peak energy efficiency. Overall, this thesis analyzes and designs the IRSA protocol under several practical non-idealities. The developed algorithms vastly outperform state-of-the-art and can efficiently serve mMTC applications

    Structure and dynamics of quantum supercooled liquids:Insights from molecular dynamics simulations

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    Supercooled liquids are formed when a liquid is cooled below the melting temperature, avoiding crystallization. The system gets trapped in one of the many metastable states in the free energy surface. In supercooled state, the dynamics of the system shows marked differences compared to the normal liquid state. Upon decreasing the temperature further, molecular motion becomes so slow that it cannot be identified in experimentally accessible timescales, with no significant changes in the liquid structure. The dynamic slow-down in supercooled liquids arises from the collective behavior or “caging” of particles by their neighbors. The thesis begins with a discussion of cage dynamics in a classical 2D model liquid. The cage time diverges as a power-law, which is much slower than the exponential divergence of the structural relaxation time. The cage sizes are correlated with the cage dynamics: small changes in the cage sizes in the deeply supercooled regime show large changes in the dynamics. Quantum effects may lead to counterintuitive behavior in the properties of liquids in the supercooled regime. The effects of quantum fluctuations on the dynamical and structural properties of supercooled liquids are studied in a simple atomistic model system, using molecular dynamics simulations. The quantum effects are accounted for using the quantum-classical ring polymer isomorphism. The interplay of the classical confining potential and the quantum tunneling brings in interesting effects. The effects of quantumness on the cages are analyzed. Dynamic heterogeneity is a hallmark of supercooled liquids. The qualitative changes in the dynamic heterogeneity due to quantum effects are studied by analyzing the tagged particle dynamics. In contrast to the classical case, quantum liquids show large dynamic heterogeneities at short timescales. Finally, the manifestations of quantum effects in supercooled water are studied. Molecular systems have additional degrees of freedom as compared to the atomistic system, which can give rise to more complex dynamics. The inclusion of quantum nature affects the structure and dynamics of water in the low-temperature regime. The dynamics is discussed in terms of the neighbor shells of a molecule, which shows some interesting features that arise due to inter-shell migration of molecules

    On the Optimality of Generative Adversarial Networks — A Variational Perspective

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    Generative adversarial networks (GANs) are a popular learning framework to model the underlying distribution of images. GANs comprise a min-max game between the generator and the discriminator. While the generator transforms noise into realistic images, the discriminator learns to distinguish between the reals and the fakes. GANs are trained to either minimize a divergence function or an integral probability metrics (IPMs). In this thesis, we focus on understanding the optimality of GAN discriminator, generator, and its inputs, viewed from the perspective of Variational Calculus. Considering both divergence- and IPM-minimizing GANs, with and without gradient-based regularizers, we analyze the optimality of the GAN discriminator. We show that the optimal discriminator solves the Poisson partial differential equation, and derive solutions involving Fourier-series and radial basis function expansions. We show that providing the generator with data coming from a closely related input datasets accelerates and stabilizes training even in scenarios where there is no visual similarity between the source and target datasets. To identify closely related datasets, we propose the “signed Inception distance” (SID) as a novel GAN measure. Through the variational formulation, we demonstrate that the the optimal generator in GANs is linked to score-based Langevin diffusion and gradient flows. Leveraging these insights, we explore training GANs with flow-based and score-based costs, and diffusion models that perform discriminator-based updates

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    etd@IISc Electronic Theses and Dissertations at Indian Institute of Science
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