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GIS rasters to identify best sites for creating habitat for American Woodcock in Rhode Island
Get PDFThe University of Rhode Island has conducted many studies of the habitat use of American Woodcock (Scolopax minor) in Rhode Island, USA. In 2020 we developed a new geographic information system (GIS) tool based on our previous research to identify sites in Rhode Island where forest clearcutting to create young forest habitat would have the most positive effect for American woodcock. We believe that our new tool is effective, and that it helps landowners identify the best locations on their properties to improve woodcock habitat. This report provides public access to the GIS rasters of the tool and to an article providing more details about how the tool was created
Sphericity and Symmetry Breaking in Asymmetric Diblock Copolymer Melts
Get PDFBlock polymers have captured the interest of scientists and engineers for more than half a century. In general, the phase behavior of A-B diblock copolymers, the simplest category of such self-assembling macromolecules, has been accepted as thoroughly understood. Experiments and theory conducted over the past decade have revealed remarkable phase complexity in the limit of asymmetric compositions, where the A block is considerably shorter than the B block, resulting in the formation of nanoscale micelles. Small-angle x-ray scattering (SAXS) measurements have revealed the formation of various low symmetry Frank-Kasper phases and a dodecagonal quasicrystal, reflecting fascinating analogies with the phase behavior of metal alloys. These findings will be discussed in the context of a competition between the tendency to form spherical particles and the constraints associated with filing space at uniform density
Direction, not detail: Progress towards consensus at the fourth intergovernmental conference on biodiversity beyond national jurisdiction
Get PDFAfter a two year delay caused by the COVID-19 pandemic, the fourth intergovernmental conference (IGC-4) in the negotiations for a new UN treaty to address the conservation and sustainable management of biodiversity beyond national jurisdiction (BBNJ) took place in March 2022. This meeting differed substantially from previous IGCs in terms of process, with much of the discussions occurring in ‘informal informals,’ or off-the-record meetings open only to delegates and registered observers. Additionally, in-person participation was extremely limited and observers only had access to web broadcasts, i.e., no in-person interactions with delegates. A draft text of the treaty was circulated in advance and provided the basis for discussion and negotiation at the meeting. This paper examines IGC-4 in line with previous analyses of the first three IGCs, tracing the process and outcomes to date, aiming to understand the factors and players that are building a new BBNJ agreement. Key themes explored include marine genetic resources (MGRs), area-based management tools, including marine protected areas (ABMTs/MPAs), environmental impact assessment (EIA), and capacity building and transfer of marine technology (CB/TMT). Some progress toward consensus has been made, buoyed by intersessional discussions, but several sticking points remain with regard to definitions, content, and processes enshrined in the draft treaty, and a fifth IGC is scheduled to take place from 15 to 26 August 2022
Pattern and timing of mitochondrial divergence of island spotted skunks on the California Channel Islands
No full textIsland spotted skunks (Spilogale gracilis amphiala) are a rare subspecies endemic to the California Channel Islands, currently extant on Santa Cruz and Santa Rosa islands. How and when skunks arrived on the islands is unknown, hindering decision-making about their taxonomic status and conservation priority. We investigated these questions by sequencing the complete mitochondrial genomes of 55 skunks from the two islands and mainland (California and Arizona) and examining phylogenetic patterns and estimations of isolation times among populations. Island spotted skunks grouped in a single monophyletic clade distinct from mainland spotted skunks. A haplotype network analysis had the most recent common ancestral haplotype sampled from an individual on Santa Rosa, suggesting both islands were colonized by a single matriline. Additionally, no haplotypes were shared between skunk populations on the two islands. These patterns imply that both island populations were derived from a common ancestral population shortly after establishment and have remained isolated from each other ever since. Together with divergence estimates from three methods, this topology is consistent with colonization of the super-island, Santarosae, by a single ancestral population of spotted skunks in the early Holocene, followed by divergence as the sea level rose and split Santarosae into Santa Cruz and Santa Rosa islands 9,400-9,700 years ago. Such a scenario of colonization could be explained either by rafting or one-time transport by Native Americans. Given their distinct evolutionary history, high levels of endemism, and current population status, island spotted skunks may warrant management as distinct evolutionarily significant units
Madagascar Terrestrial Camera Survey Database 2021: A collation of protected forest camera surveys from 2007–2021
No full textMadagascar is a threatened global biodiversity hotspot and conservation priority, yet we lack broad-scale surveys to assess biodiversity across space and time. To fill this gap, we collated camera trap surveys, capturing species occurrences within Madagascar into a single standardized database. This data set includes nine distinct protected areas of Madagascar and encompasses 13 subprojects, 38 camera arrays, and 1156 sampling units (independent camera site per survey) within two important biodiversity eco-regions: western dry deciduous forest and eastern humid rainforest. Camera surveys were conducted from June 2007 to January 2021. The final data set includes 17 unique families of mammals (Bovidae, Canidae, Cheirogaleidae, Daubentoniidae, Equidae, Eupleridae, Felidae, Hominidae, Indriidae, Lemuridae, Lepilemuridae, Muridae, Nesomyidae, Pteropodidae, Soricidae, Suidae, Tenrecidae) comprising 45 species and 27 unique families of birds (Accipitridae, Acrocephalidae, Alcedinidae, Bernieridae, Brachypteraciidae, Caprimulgidae, Cisticolidae, Columbidae, Coraciidae, Corvidae, Cuculidae, Dicruridae, Mesitornithidae, Monarchidae, Motacillidae, Muscicapidae, Numididae, Phasianidae, Rallidae, Sarothruridae, Strigidae, Sturnidae, Sulidae, Threskiornithidae, Upupidae, Vangidae, Zosteropidae) comprising 58 species. Images were processed and verified by individual project data set creators and camera operation and species tables were then collated. The final product represents the first broad-scale freely available standardized formal faunal database for Madagascar. Data are available through this publication and at DOI: 10.5281/zenodo.5801806. These data will be useful for examining species-level and community-level trends in occurrence across space or time within Madagascar and globally, evaluating native and invasive species dynamics, and will aid in determining species conservation status and planning for at-risk species. There are no copyright restrictions; please cite this paper when using the data for publication
SNAPSHOT USA 2020: A second coordinated national camera trap survey of the United States during the COVID-19 pandemic
No full textManaging wildlife populations in the face of global change requires regular data on the abundance and distribution of wild animals, but acquiring these over appropriate spatial scales in a sustainable way has proven challenging. Here we present the data from Snapshot USA 2020, a second annual national mammal survey of the USA. This project involved 152 scientists setting camera traps in a standardized protocol at 1485 locations across 103 arrays in 43 states for a total of 52,710 trap-nights of survey effort. Most (58) of these arrays were also sampled during the same months (September and October) in 2019, providing a direct comparison of animal populations in 2 years that includes data from both during and before the COVID-19 pandemic. All data were managed by the eMammal system, with all species identifications checked by at least two reviewers. In total, we recorded 117,415 detections of 78 species of wild mammals, 9236 detections of at least 43 species of birds, 15,851 detections of six domestic animals and 23,825 detections of humans or their vehicles. Spatial differences across arrays explained more variation in the relative abundance than temporal variation across years for all 38 species modeled, although there are examples of significant site-level differences among years for many species. Temporal results show how species allocate their time and can be used to study species interactions, including between humans and wildlife. These data provide a snapshot of the mammal community of the USA for 2020 and will be useful for exploring the drivers of spatial and temporal changes in relative abundance and distribution, and the impacts of species interactions on daily activity patterns. There are no copyright restrictions, and please cite this paper when using these data, or a subset of these data, for publication
Body composition of American Woodcock during fall staging: a validation of the non-invasive deuterium dilution method
No full textWe conducted the first validation of the deuterium dilution method as a nonlethal technique for estimating the body composition of a shorebird during fall staging as birds fatten in preparation for their migration. For this validation, we captured male (n = 12) and female (n = 8) American Woodcock (Scolopax minor) in the fall of 2018 and 2019 in southern New England, USA. We developed predictive models for estimating body composition of woodcock given each bird’s body mass and deuterium space, a proxy for total body water space, estimated using the deuterium dilution method. Accuracy and precision of these predictive models were assessed by comparing the model predictions with directly measured body composition. The top models predicted whole-body lean and fat mass with a relative error of 1.37% and 11.26%, respectively. In comparison, conventionally used morphology-based condition indices were poor predictors of fat mass in fall-staging woodcock. We applied this method to accurately estimate body composition dynamics of woodcock during fall staging, a period of fattening in the annual cycle that is pertinent to subsequent migratory movements, phenology, survival, and habitat management for woodcock. This nonlethal technique also has broad applicability to other migratory birds that show substantial changes in body composition as they prepare for key life-history events such as migration
Exploratory surveys in Taiwan of the roseau cane scale Nipponaclerda biwakoensis Kuwana (Hemiptera: Aclerdidae) and its associated parasitoids
No full textRoseau cane (Phragmites australis (Cav). Trin. ex Steud.) is the dominant plant species of the Mississippi River Delta in Louisiana, USA, and protects the coastline from erosion and storm-related impacts, maintaining shipping channels and oil infrastructure. Widespread dieback and thinning of P. australis were noted in the Mississippi River Delta in the fall of 2016. Invasive populations of the roseau cane scale (Nipponaclerda biwakoensis Kuwana), which is native to Asia, were found at outbreak levels in the stands. Subsequent research implicated N. biwakoensis in the diebacks. As a safe, cost-effective and long-term approach for managing this invasive scale, classical (importation) biological control methods are being considered. As the first step to developing biological control, research evaluating the natural enemies of the N. biwakoensis in the native range is necessary. This study investigated the population dynamics of N. biwakoensis and its associated parasitoids on P. australis in Taiwan from July to November 2019 at five study sites. Scale densities across sites increased over the growing season, peaking in September at 85.77 ± 6.36 scales/stem, which is half as dense as found in Louisiana. Mean parasitism of adult female scales across sites and season was 14.00%, while parasitism on immature scales was lower (3.00%). Four parasitoid wasp species were reared from the scale—Asytymachus lasallei Noyes and Higashiura, Boucekiella depressa Hoffer, Neastymachus japonicus Tachikawa and Aprostocetus sp. Westwood. Neastymachus japonicus was the dominant species parasitizing adult female scales, while A. lasallei was the dominant wasp species parasitizing immature scales. Astymachus lasallei and B. depressa were frequently reared from the same individual host, suggesting multiparasitism or hyperparasitism. Overall, this study provides important information on the identity and role of parasitoids of N. biwakoensis in its native range, which will aid in developing a classical biological control programme for the invasive N. biwakoensis
Perkinsus marinus suppresses in vitro eastern oyster apoptosis via IAP-dependent and caspase-independent pathways involving TNFR, NF-kB, and oxidative pathway crosstalk
Get PDFThe protozoan parasite Perkinsus marinus causes Dermo disease in eastern oysters, Crassostrea virginica, and can suppress apoptosis of infected hemocytes using incompletely understood mechanisms. This study challenged hemocytes in vitro with P. marinus for 1 h in the presence or absence of caspase inhibitor Z-VAD-FMK or Inhibitor of Apoptosis protein (IAP) inhibitor GDC-0152. Hemocytes exposure to P. marinus significantly reduced granulocyte apoptosis, and pre-incubation with Z-VAD-FMK did not affect P. marinus-induced apoptosis suppression. Hemocyte pre-incubation with GDC-0152 prior to P. marinus challenge further reduced apoptosis of granulocytes with engulfed parasite, but not mitochondrial permeabilization. This suggests P. marinus-induced apoptosis suppression may be caspase-independent, affect an IAP-involved pathway, and occur downstream of mitochondrial permeabilization. P. marinus challenge stimulated hemocyte differential expression of oxidation-reduction, TNFR, and NF-kB pathways. WGCNA analysis of P. marinus expression in response to hemocyte exposure revealed correlated protease, kinase, and hydrolase expression that could contribute to P. marinus-induced apoptosis suppression