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Energy consumption and cooperation for optimal sensing
Get PDFThe reliable detection of environmental molecules in the presence of noise is an important cellular function, yet the underlying computational mechanisms are not well understood. We introduce a model of two interacting sensors which allows for the principled exploration of signal statistics, cooperation strategies and the role of energy consumption in optimal sensing, quantified through the mutual information between the signal and the sensors. Here we report that in general the optimal sensing strategy depends both on the noise level and the statistics of the signals. For joint, correlated signals, energy consuming (nonequilibrium), asymmetric couplings result in maximum information gain in the low-noise, high-signal-correlation limit. Surprisingly we also find that energy consumption is not always required for optimal sensing. We generalise our model to incorporate time integration of the sensor state by a population of readout molecules, and demonstrate that sensor interaction and energy consumption remain important for optimal sensing.journal articl
Polarization-Controlled Cavity Input-Output Relations
Get PDFCavity input-output relations (CIORs) describe a universal formalism relating each of the far-field amplitudes outside the cavity to the internal cavity fields. Conventionally, they are derived based on a weak-scattering approximation. In this context, the amplitude of the off-resonant field remains nearly unaffected by the cavity, with the high coupling efficiency into cavity modes being attributed to destructive interference between the transmitted (or reflected) field and the output field from the cavity. In this Letter, we show that, in a whispering gallery resonator-waveguide coupled system, in the strong-scattering regime, the off-resonant field approaches to zero, but more than 90% coupling efficiency can still be achieved due to the Purcell-enhanced channeling. As a result, the CIORs turn out to be essentially different than in the weak-scattering regime. With this fact, we propose that the CIOR can be tailored by controlling the scattering strength. This is experimentally demonstrated by the transmission spectra exhibiting either bandstop or bandpass-type behavior according to the polarization of the input light field.journal articl
Imaging of the Atomic Structure of All-Inorganic Halide Perovskites
Get PDFAll-inorganic halide perovskites are promising materials for optoelectronic applications. The surface or interface structure of the perovskites plays a crucial role in determining the optoelectronic conversion efficiency, as well as the material stability. A thorough understanding of surface atomic structures of the inorganic perovskites and their contributions to their optoelectronic properties and stability is lacking. Here we show a scanning tunneling microscopy investigation on the atomic and electronic structure of CsPbBr3 perovskite. Two different surface structures with a stripe and an armchair domain are identified, which originates from a complex interplay between Cs cations and Br anions. Our findings are further supported and correlated with density functional theory calculations and photoemission spectroscopy measurements. The stability evaluation of photovoltaic devices indicates a higher stability for CsPbBr3 in comparison with MAPbBr3, which is closely related to the low volatility of Cs from the perovskite surface.journal articl
Finding cell-specific expression patterns in the early Ciona embryo with single-cell RNA-seq
Get PDFSingle-cell RNA-seq has been established as a reliable and accessible technique enabling new types of analyses, such as identifying cell types and studying spatial and temporal gene expression variation and change at single-cell resolution. Recently, single-cell RNA-seq has been applied to developing embryos, which offers great potential for finding and characterising genes controlling the course of development along with their expression patterns. In this study, we applied single-cell RNA-seq to the 16-cell stage of the Ciona embryo, a marine chordate and performed a computational search for cell-specific gene expression patterns. We recovered many known expression patterns from our single-cell RNA-seq data and despite extensive previous screens, we succeeded in finding new cell-specific patterns, which we validated by in situ and single-cell qPCR.journal articl
A chordate species lacking Nodal utilizes calcium oscillation and Bmp for left–right patterning
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Ultrafast Control of the Dimensionality of Exciton-Exciton Annihilation in Atomically Thin Black Phosphorus
Get PDFUsing microtransient absorption spectroscopy, we show that the dynamical form of exciton-exciton annihilation in atomically thin black phosphorous can be made to switch between time varying 1D scattering and time-independent 2D scattering. At low carrier densities, anisotropy drives the 1D behavior, but as the photoexcitation density approaches the exciton saturation limit, the 2D nature of exciton-exciton scattering takes over. Furthermore, lowering the temperature provides a handle on the ultrafast timescale at which the 1D to 2D transition occurs. We understand our results quantitatively using a diffusion based model of exciton-exciton scattering.journal articl
Metal–metal cooperative bond activation by heterobimetallic alkyl, aryl, and acetylide PtII/CuI complexes
Get PDFWe report the selective formation of heterobimetallic PtII/CuI complexes that demonstrate how facile bond activation processes can be achieved by altering the reactivity of common organoplatinum compounds through their interaction with another metal center. The interaction of the Cu center with the Pt center and with a Pt-bound alkyl group increases the stability of PtMe2 towards undesired rollover cyclometalation. The presence of the CuI center also enables facile transmetalation from an electron-deficient tetraarylborate [B(ArF)4]− anion and mild C–H bond cleavage of a terminal alkyne, which was not observed in the absence of an electrophilic Cu center. The DFT study indicates that the Cu center acts as a binding site for the alkyne substrate, while activating its terminal C–H bond.journal articl
Modern termites inherited the potential of collective construction from their common ancestor
Get PDFAnimal collective behaviors give rise to various spatial patterns, such as the nests of social insects. These structures are built by individuals following a simple set of rules, slightly varying within and among species, to produce a large diversity of shapes. However, little is known about the origin and evolution of the behavioral mechanisms regulating nest structures. In this study, we discuss the perspective of inferring the evolution of collective behaviors behind pattern formations using a phylogenetic framework. We review the collective behaviors that can be described by a single set of behavioral rules, and for which variations of the environmental and behavioral parameter values produce diverse patterns. We propose that this mechanism could be at the origin of the pattern diversity observed among related species, and that, when they are placed in the proper conditions, species have the behavioral potential to form patterns observed in related species. The comparative analysis of shelter tube construction by lower termites is consistent with this hypothesis. Although the use of shelter tubes in natural conditions is variable among species, most modern species have the potential to build them, suggesting that the behavioral rules for shelter tube construction evolved once in the common ancestor of modern termites. Our study emphasizes that comparative studies of behavioral rules have the potential to shed light on the evolution of collective behaviors.journal articl
Observation of the 87Rb 5S1/2 to 4D3/2 electric quadrupole transition at 516.6 nm mediated via an optical nanofibre
Get PDFLight guided by an optical nanofibre has a very steep evanescent field gradient extending from the fibre surface. This gradient can be exploited to drive electric quadrupole transitions in nearby quantum emitters. In this paper, we report on the observation of the 5S 1/2 →4D 3/2 electric quadrupole transition at 516.6 nm (in vacuum) in laser-cooled 87Rb atoms using only a few μW of laser power propagating through an optical nanofibre embedded in the atom cloud. This work extends the rangeof applications for optical nanofibres in atomic physics to include more fundamental tests such as high-precision measurements of parity non-conservation.journal articl
Rheology of the Electric Double Layer in Electrolyte Solutions
Get PDFElectric double layers (EDLs) are ionic structures formed on charged surfaces and play an important role in various biological and industrial processes. An extensive study in the past decade has revealed the structure of the EDL in concentrated electrolyte solutions of both ordinary salts and ionic liquids. However, how the EDL structure affects their material properties remains a challenging topic due to technical difficulties of these measurements at nanoscale. In this work, we report the first detailed characterization of the viscoelasticity of the EDL formed over a wide range of ion concentrations, including concentrated electrolyte solutions. Specifically, we investigate the complex shear modulus of the EDL by measuring the resonant frequency and the energy dissipation of a quartz crystal microbalance (QCM), a surface-sensitive device, immersed in aqueous solutions containing three types of solutes: an ionic liquid, 1-butyl-3-methylimidazolium chloride (BmimCl); an ordinary salt, sodium chloride (NaCl); and a nonelectrolyte, ethylene glycol (EG). For the two electrolyte solutions, we observe a monotonic decrease in the resonant frequency and a monotonic increase in the energy dissipation with increasing ion concentrations due to the presence of the EDL. The complex shear modulus of the EDL is estimated through a wave propagation model in which the density and shear modulus of the EDL decay exponentially toward those of the bulk solution. Our results show that both the storage and the loss modulus of the EDL increase rapidly with increasing ion concentrations in the low ion concentration regime (<1 M) but reach saturation values with similar magnitude at a sufficiently high ion concentration. The shear viscosity of the EDL near the charged QCM surface is approximately 50 times for NaCl solutions and 500 times for BmimCl solutions of the bulk solution value at the saturation concentration. We also demonstrate that QCM can be utilized for analyzing the rheological properties of the EDL, thus providing a complementary, low-cost, and portable alternative to conventional laboratory instruments such as the surface force apparatus. Our results elucidate new perspectives on the viscoelastic properties of the EDL and can potentially guide device optimization for applications such as biosensing and fast charging of batteries.journal articl