Dryad Digital Repository (Duke University)

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    197463 research outputs found

    semilandmarks (cichlid body)

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    - Table designating which body shape coordinates are sliding semilandmarks. - For use in Procrustes shape alignment in the “gpagen” function in the R package, geomorph. - See manuscript figure 3A for visualization of which coordinates were used as sliding semilandmarks and which were fixed landmarks in this study

    R script

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    R script to run MCMC simulation for the association analysis

    Raw data for Figure 3

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    Contains raw flow cytometry data for Figure 3. A description of this data can be found in the Excel sheet containing data for the remaining figures

    YCNP_tree_model_data_1

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    This MS Excel file contains primary response and covariate data used to build models of tree species occupancy and abundance in Yukon-Charley Rivers National Preserve

    S14_Supplemental_material: Fifty-seven individual measurements of investigated specimens of Beremendia fissidens, B. cf. fissidens, and B. minor from 16 early Pliocene–Early Pleistocene localities in Russia (Siberia), Kazakhstan, and Mongolia

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    Fifty-seven individual measurements (mm) of investigated specimens of Beremendia fissidens, B. cf. B. fissidens, and B. minor from 16 early Pliocene–Early Pleistocene localities of Russia (Siberia), Kazakhstan and Mongolia. Abbreviations see in the main text

    Orthoptera dataset (plain text)

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    Plain text version of the Orthoptera dataset, used for statistical analyses. The references are listed in the Excel spreadsheet

    Code: The fast-slow continuum hypothesis in Orthoptera

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    R code for analyses within Orthoptera, including: PGLS analyses, imputation of missing data (at various levels of completeness), and phylogenetic PCAs

    Data_Heredity_YANLI_2019

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    R code and data for prioritization analyses

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    Zip file containing prioritization R code and species distribution model output maps used as input layers in prioritization analyses. The 'InputMaps_1kmSabah' folder includes probability of occurrence maps for: (1) the 15 endemic butterfly species ('Endemic_15' sub-folder), and (2) the 62 Sundaland-restricted (but non-endemic) butterfly species ('NonEndemic_62' sub-folder) across Sabah. R code for prioritization analyses using the prioritizr package is provided in the 'Prioritization_butterflies.R' R script file

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