197463 research outputs found
Sort by
Gee & Reisz_Supplemental Figure 1
No full textSupplemental Figure 1. Results of phylogenetic analysis of Nanobamus macrorhinus in the matrix of Schoch (2019) (35 taxa, 108 characters); tree visually pruned to focus on Amphibamiforms. (1) majority rule consensus of the first 107-character (removal of character 17) sampling permutation; (2) strict consensus tree of the same permutation with bootstrap support and Bremer decay index (the latter in parentheses); (3) majority rule consensus of the second 107-character sampling (removal of character 30) permutation; (4) strict consensus tree of the same permutation with bootstrap support and Bremer decay index
Total protein
No full texteggs used in the "egg volume" file were then sorted into samples of 3 eggs and their protein was quantified and compiled into this file
Input files and relatedness estimates from KGD
No full textInput files produced using ANGSD and relatedness matrices estimated using KGD
1000MeliphagidesTrees
No full textPosterior distribution of 1000 trees of the Meliphagides from the study of Marki et al. (2017) Mol. Phylogen. Evol
Brassavola nodosa - Chloroplast haplotype sequence data
No full textBrassavola nodosa - Chloroplast haplotype sequence data. Annotated sequences of 2 regions: trnL/rpL32F and 5'trnG/3'trnG (1340 bp
Temporal overlap: top-predator introduction
No full textCamera data used to analyse changes in temporal activity following the introduction of Tasmanian devils to Maria Island. This data file was used in the analysis of circular overlap, and was used to produce the right column of Figure 2 from our paper in Ecography. See README for details about variables
Changes in Tasmanian devil temporal activity following population decline
No full textChanges in Tasmanian devil temporal activity following severe population declines.Camera data was analysed using a GAM to produce Fig 3A of our paper in Ecography. Tasmanian devil records at each site were binned into the nearest hourly bin i.e. there was a total of 24 bins. We then calculated the proportion of total activity in each hour of the day for each site. See paper for details
3 MHC haplotypes
No full textThis file includes the raw data on MHC IIB haplotypes of hosts investigated across 6 sites. Variables include an individual identification number, population of origin for each host individual, the total number of MHC IIB alleles per individual, and individual-level presence or absence information for all 81 alleles documented in the study. Sequence data is available through Genbank
4 BSD temporal variation
No full textRaw data of the presence of black spot disease (BSD; Uvulifer sp.) across a temporal series of samples from all 6 population investigated in this study. Variables included are year of collection, habitat type, population of origin, as well as the number of Uvulifer cysts and the presence or absence of Uvulifer cysts. Note that data is not available for all populations and all years (see main manuscript) and that only presence/absence data was available for some years
1 Parasite communities
No full textThis file includes the raw data about the occurrence of parasites across 6 sites investigated in the study. Included are data for individual hosts and counts of specific parasites as outlined in the paper. Variables include an individual identification number (which is also used for the MHC and microsatellite data), population of origin for each host individual, sex, standard length (in millimeter), as well as the number of Oodinium, Ambiphyra, Trichodina, Dactylogyrus, Gyrodactylus, Diplostomum cf. spathaceum, Echinochasmus cf. donaldsoni, Uvulifer, Trematode 1, Trematode 2, Trematode 3, Nematode, Cestode, and Lernea recorded per host