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Convergent evolution in toothed whale cochleae
Get PDFBackground
Odontocetes (toothed whales) are the most species-rich marine mammal lineage. The catalyst for their evolutionary success is echolocation - a form of biological sonar that uses high-frequency sound, produced in the forehead and ultimately detected by the cochlea. The ubiquity of echolocation in odontocetes across a wide range of physical and acoustic environments suggests that convergent evolution of cochlear shape is likely to have occurred. To test this, we used SURFACE; a method that fits Ornstein-Uhlenbeck (OU) models with stepwise AIC (Akaike Information Criterion) to identify convergent regimes on the odontocete phylogeny, and then tested whether convergence in these regimes was significantly greater than expected by chance.
Results
We identified three convergent regimes: (1) True’s (Mesoplodon mirus) and Cuvier’s (Ziphius cavirostris) beaked whales; (2) sperm whales (Physeter macrocephalus) and all other beaked whales sampled; and (3) pygmy (Kogia breviceps) and dwarf (Kogia sima) sperm whales and Dall’s porpoise (Phocoenoides dalli). Interestingly the ‘river dolphins’, a group notorious for their convergent morphologies and riverine ecologies, do not have convergent cochlear shapes. The first two regimes were significantly convergent, with habitat type and dive type significantly correlated with membership of the sperm whale + beaked whale regime.
Conclusions
The extreme acoustic environment of the deep ocean likely constrains cochlear shape, causing the cochlear morphology of sperm and beaked whales to converge. This study adds support for cochlear morphology being used to predict the ecology of extinct cetaceans.© The Author(s). 2019
Open Access: This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.NHM Repositor
Sequestration of Martian CO2 by mineral carbonation
Get PDFThis is an OA journal publicationCarbonation is the water-mediated replacement of silicate minerals, such as olivine, by carbonate, and is commonplace in the Earth’s crust. This reaction can remove significant quantities of CO2 from the atmosphere and store it over geological timescales. Here we present the first direct evidence for CO2 sequestration and storage on Mars by mineral carbonation. Electron beam imaging and analysis show that olivine and a plagioclase feldspar-rich mesostasis in the Lafayette meteorite have been replaced by carbonate. The susceptibility of olivine to replacement was enhanced by the presence of smectite veins along which CO2-rich fluids gained access to grain interiors. Lafayette was partially carbonated during the Amazonian, when liquid water was available intermittently and atmospheric CO2 concentrations were close to their present-day values. Earlier in Mars’ history, when the planet had a much thicker atmosphere and an active hydrosphere, carbonation is likely to have been an effective mechanism for sequestration of CO2.This article is licensed under a Creative Commons Attribution 3.0 Unported Licence. To view a copy of this licence visit http://creativecommons.org/licenses/by/3.0/. The attached file is the published pdfNHM Repositor
“Hope” is the thing with feathers: how useful are cyclomethicones when cleaning taxidermy?
Get PDFSilicone solvents have extreme hydrophobicity so they can be used as a temporary barrier to aqueous cleaning solutions. They are characterised as having low odour, moderately low toxicity, low polarity and surface tension. They are 100% volatile so will leave no trace behind. Silicone solvents could potentially be used to flood the skin of taxidermy specimens, to provide a barrier whilst fur or feathers are cleaned, and even permit the use of heat treatments without causing damage to the skin. They will not cause drying or swelling and will not dissolve or mobilise any skin components such as dyes or fats, which would normally be adversely affected by water or other solvents. They are also, in theory, safe to use on skin which has suffered so much deterioration that the shrinkage temperature is close to room temperature. Different classes of silicone solvents have different working times and this article explores 3 of these, and their practical applicability when cleaning taxidermy.NatSCA Notes & Comments is published by the Natural Sciences Collections Association (NatSCA) and distributed under a Creative Commons Attribution 4.0 International Licence (CC BY 4.0; https://creativecommons.org/licenses/by/4.0/). Works can be shared and adapted for any purpose, including commercially. CC BY 4.0 allows maximum dissemination, which is integral to the aims of NatSCA. All authors retain the copyright in their work.NHM Repositor
Eliopoulosite, V7S8, A New Sulfide from the Podiform Chromitite of the Othrys Ophiolite, Greece
Get PDFThe new mineral species, eliopoulosite, V7S8, was discovered in the abandoned chromium mine of Agios Stefanos of the Othrys ophiolite, located in central Greece. The investigated samples consist of massive chromitite hosted in a strongly altered mantle tectonite, and are associated with nickelphosphide, awaruite, tsikourasite, and grammatikopoulosite. Eliopoulosite is brittle and has a metallic luster. In plane-reflected polarized light, it is grayish-brown and shows no internal reflections, bireflectance, and pleochroism. It is weakly anisotropic, with colors varying from light to dark greenish. Reflectance values of mineral in air (Ro, Re’ in %) are: 34.8–35.7 at 470 nm, 38–39 at 546 nm, 40–41.3 at 589 nm, and 42.5–44.2 at 650 nm. Electron-microprobe analyses yielded a mean composition (wt.%) of: S 41.78, V 54.11, Ni 1.71, Fe 1.1, Co 0.67, and Mo 0.66, totali 100.03. On the basis of Σatoms = 15 apfu and taking into account the structural data, the empirical formula of eliopoulosite is (V6.55Ni0.19Fe0.12Co0.07Mo0.04)Σ = 6.97S8.03. The simplified formula is (V, Ni, Fe)7S8 and the ideal formula is V7S8, which corresponds to V 58.16%, S 41.84%, total 100 wt.%. The density, based on the empirical formula and unit-cell volume refined form single-crystal structure XRD data, is 4.545 g·cm−3. The mineral is trigonal, space group P3221, with a = 6.689(3) Å, c = 17.403(6) Å, V = 674.4(5) Å3, Z = 3, and exhibits a twelve-fold superstructure (2a × 2a × 3c) of the NiAs-type subcell with V-atoms octahedrally coordinated by S atoms. The distribution of vacancies is discussed in relation to other pyrrhotite-like compounds. The mineral name is for Dr. Demetrios Eliopoulos (1947–2019), a geoscientist at the Institute of Geology and Mineral Exploration (IGME) of Greece and his widow, Prof. Maria Eliopoulos (nee Economou, 1947), University of Athens, Greece, for their contributions to the knowledge of ore deposits of Greece and to the mineralogical, petrographic, and geochemical studies of ophiolites, including the Othrys complex. The mineral and its name have been approved by the Commission of New Minerals, Nomenclature, and Classification of the International Mineralogical Association (No. 2019-96).© 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access
article distributed under the terms and conditions of the Creative Commons Attribution
(CC BY) license (http://creativecommons.org/licenses/by/4.0/).NHM Repositor
Seasonal ingestion of anthropogenic debris in an urban population of gulls
Get PDFGulls are generalist seabirds, increasingly drawn to urban environments where many species take advantage of abundant food sources, such as landfill sites. Despite this, data on items ingested at these locations, including human refuse, is limited. Here we investigate ingestion of prey and anthropogenic debris items in boluses (regurgitated pellets) from Pacific Gulls (Larus pacificus). A total of 374 boluses were collected between 2018 and 2020 in Tasmania. Debris was present in 92.51% of boluses (n = 346), with plastic (86.63%, n = 324) and glass (64.71%, n = 242) being the most prominent types. An abundance of intact, household items (e.g., dental floss, food wrappers) suggest the gulls regularly feed at landfill sites. In addition, the boluses are deposited at a roosting site located within an important wetland, thus we propose that the gulls may be functioning as a previously unrecognised vector of anthropogenic debris from urban centres to aquatic environments.The attached document is the authors’ final accepted version of the journal article. You are advised to consult the publisher’s version if you wish to cite from it.NHM Repositor
Estimating crime scene temperatures from nearby meteorological station data
Get PDFThe importance of temperature data in minimum postmortem interval (minPMI) estimations in criminal investigations is well known. To maximise the accuracy of minPMI estimations, it is imperative to investigate the different components involved in temperature modelling, such as the duration of temperature data logger placement at the crime scene and choice of nearest weather station to compare the crime scene data to. Currently, there is no standardised practice on how long to leave the temperature data logger at the crime scene and the effects of varying logger duration are little known. The choice of the nearest weather station is usually made based on availability and accessibility of data from weather stations in the crime scene vicinity. However, there are no guidelines on what to look for to maximise the comparability of weather station and crime scene temperatures. Linear regression analysis of scene data with data from weather stations with varying time intervals, distances, altitudes and microclimates showed the greatest goodness of fit (R2), i.e. the highest compatibility between datasets, after 4–10 days. However, there was no significant improvement in estimation of crime scene temperatures beyond a 5-day regression period. The smaller the distance between scene and weather station and the higher the similarity in environment, such as altitude and geographical area, resulted in greater compatibility between datasets. Overall, the study demonstrated the complexity of choosing the most comparable weather station to the crime scene, especially because of a high variation in seasonal temperature and numerous influencing factors such as geographical location, urban ‘heat island effect’ and microclimates. Despite subtle differences, for both urban and rural areas an optimal data fit was generally reached after about five consecutive days within a radius of up to 30 km of the ‘crime scene’. With increasing distance and differing altitudes, a lower overall data fit was observed, and a diminishing increase in R2 values was reached after 4–10 consecutive days. These results demonstrate the need for caution regarding distances and climate differences when using weather station data for retrospective regression analyses for estimating temperatures at crime scenes. However, the estimates of scene temperatures from regression analysis were better than simply using the temperatures from the nearest weather station. This study provides recommendations for data logging duration of operation, and a baseline for further research into producing standard guidelines for increasing the accuracy of minPMI estimations and, ultimately, greater robustness of forensic entomology evidence in court.The attached document is the authors’ final accepted version of the journal article. You are advised to consult the publisher’s version if you wish to cite from it.NHM Repositor
Two new species of Sympagella (Porifera: Hexactinellida: Rossellidae) collected from the Clarion-Clipperton Zone, East Pacific
Get PDFTwo new Hexactinellida species from the Clarion-Clipperton Zone (CCZ) in the East Pacific Ocean are described. They
are the first described representatives of the genus Sympagella in this region. The new sponges were collected in 2013
during the ABYSSLINE Project´s first cruise, AB01, on board the RV Melville. The CCZ is known for its polymetallic
nodules but megafaunal biodiversity is still poorly understood. Our findings suggest that the poriferan fauna of the eastern
CCZ is both species rich and inadequately known, and that substantially more sampling and taxonomic studies of the CCZ
sponge fauna are required to establish a megafaunal biogeography and evaluate potential extinction risks resulting from
polymetallic-nodule mining.The attached is the first page of the published pdf of the article. If you wish to cite or consult the full article please visit the publisher's website: https://doi.org/10.11646/zootaxa.4466.1.12NHM Repositor
Characterization of methane-seep communities in a deep-sea area designated for oil and natural gas exploitation off Trinidad and Tobago
Get PDFExploration of the deep ocean (>200 m) is taking on added importance as human development encroaches. Despite increasing oil and natural gas exploration and exploitation, the deep ocean of Trinidad and Tobago is almost entirely unknown. The only scientific team to image the deep seafloor within the Trinidad and Tobago Exclusive Economic Zone was from IFREMER in the 1980s. That exploration led to the discovery of the El Pilar methane seeps and associated chemosynthetic communities on the accretionary prism to the east of Trinidad and Tobago. In 2014, the E/V Nautilus, in collaboration with local scientists, visited two previously sampled as well as two unexplored areas of the El Pilar site between 998 and 1,629 m depth using remotely operated vehicles. Eighty-three megafaunal morphospecies from extensive chemosynthetic communities surrounding active methane seepage were observed at four sites. These communities were dominated by megafaunal invertebrates including mussels (Bathymodiolus childressi), shrimp (Alvinocaris cf. muricola), Lamellibrachia sp. 2 tubeworms, and Pachycara caribbaeum. Adjacent to areas of active seepage was an ecotone of suspension feeders including Haplosclerida sponges, stylasterids and Neovermilia serpulids on authigenic carbonates. Beyond this were large Bathymodiolus shell middens. Finally there was either a zone of sparse octocorals and other non-chemosynthetic species likely benefiting from the carbonate substratum and enriched production within the seep habitat, or sedimented inactive areas. This paper highlights these ecologically significant areas and increases the knowledge of the biodiversity of the Trinidad and Tobago deep ocean. Because methane seepage and chemosynthetic communities are related to the presence of extractable oil and gas resources, development of best practices for the conservation of biodiversity in Trinidad and Tobago waters within the context of energy extraction is critical. Potential impacts on benthic communities during oil and gas activities will likely be long lasting and include physical disturbance during drilling among others. Recommendations for the stewardship of these widespread habitats include: (1) seeking international cooperation; (2) holding wider stakeholder discussions; (3) adopting stringent environmental regulations; and (4) increasing deep-sea research to gather crucial baseline data in order to conduct appropriate marine spatial planning with the creation of marine protected areas.Copyright © 2017 Amon, Gobin, Van Dover, Levin, Marsh and Raineault. This
is an open-access article distributed under the terms of the Creative Commons
Attribution License (CC BY). The use, distribution or reproduction in other forums
is permitted, provided the original author(s) or licensor are credited and that the
original publication in this journal is cited, in accordance with accepted academic
practice. No use, distribution or reproduction is permitted which does not comply
with these terms.NHM Repositor
Challenges to the sustainability of deep-seabed mining
No full textThis Review focuses on whether the emerging industry of deep-seabed mining aligns with the sustainable development agenda. We cover motivations for deep-seabed mining, including to source metals for technology that assists with decarbonization, as well as governance issues surrounding the extraction of minerals. Questions of sustainability and ethics, including environmental, legal, social and rights-based challenges, are considered. Slowing the transition from exploration to exploitation and promoting a circular economy may have regulatory, technological and environmental benefits.The following is an open access article published under the Creative Commons Attribution v4.0 International licence (CC BY)
Preparing detailed morphological features of fossil brittle stars (Ophiuroidea, Echinodermata) for scanning electron microscopy using a combination of mechanical preparation techniques.
Get PDFIn order to facilitate detailed SEM analysis of recently available, undescribed fossil ophiuroid material from the Aptian, Lower Cretaceous, Atherfield Clay Formation of the Isle of Wight, Hampshire, UK a combination of careful mechanical preparation techniques was employed to great effect. Specimens were initially exposed using standard air abrasive techniques, but the final few millimetres of matrix were removed using pins. To get individual arm pieces exceptionally clear of matrix, they were removed from the blocks using a mini pedestalling technique and then further cleaned using an ultrasonic pen. This combination of techniques fully exposed all the elements required for full taxonomic study without causing severe damage to the plate surfaces and greatly improved the overall aesthetic of the specimens. These techniques could be more widely applied in fossil preparation.Issues older than two years are freely available from the GCG website (www.geocurator.org) via a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International Public Licence (CC BY-NC-ND 4.0: https://creativecommons.org/licenses/by-nc-nd/4.0/). Attribution should follow standard academic format, with the author(s) and year and link to a full reference. The attached file is the published pdf.NHM Repositor