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Effect of intra-partum azithromycin on gut microbiome development in early childhood
Intrapartum azithromycin is being evaluated as a potential intervention for preventing maternal sepsis and mortality. This study evaluated the effect of intrapartum azithromycin on the development of the child gut microbiome over the first 3 years of life. The study used samples from healthy Gambian children who were recruited in the PregnAnZI-2 trial (ClinicalTrials.org NCT03199547). PregnAnZI-2 was a large clinical trial conducted in The Gambia and Burkina Faso to assess the effect of 2g oral azithromycin given to women during labour, on neonatal sepsis and mortality
Code for "Mapping the evidence of novel plant-based foods: A systematic review of nutritional, health, and environmental impacts in high-income countries"
The zip file included in this release contains the Jupyter Notebooks with all the code used for machine learning in our submission to the Nutrition Reviews Journal: Nájera Espinosa S. et al. Mapping the evidence of novel plant-based foods: a systematic review of nutritional, health, and environmental impacts in high-income countries, Nutrition Reviews, 2024, nuae031, https://doi.org/10.1093/nutrit/nuae031
Dataset: NECTAR1 Randomized Controlled Trial
The NECTAR1 trial evaluated the efficacy of pyronaridine–artesunate and dihydroartemisinin–piperaquine with and without single low-dose primaquine for reducing gametocyte density and transmission to mosquitoes in Mali
klebgenomics/Kleborate: v2.5
Kleborate is a tool to screen genome assemblies of Klebsiella pneumoniae and the Klebsiella pneumoniae species complex (KpSC) for: MLST sequence type; species (e.g. K. pneumoniae, K. quasipneumoniae, K. variicola, etc.); ICEKp associated virulence loci: yersiniabactin (ybt), colibactin (clb); virulence plasmid associated loci: salmochelin (iro), aerobactin (iuc), hypermucoidy (rmpA, rmpA2); antimicrobial resistance genes, including quinolone resistance SNPs and colistin resistance truncations; K (capsule) and O antigen (LPS) serotype prediction, via wzi alleles and Kaptive
Additional file 4 of Time of exposure and assessment influence the mortality induced by insecticides against metabolic resistant mosquitoes
Cone bioassay data on the time of exposure and assessment of mortality of laboratory-reared mosquitoes
ciarajudge/EpiFusion
Repository for EpiFusion, an infectious disease modelling framework built on the principles of phylodynamics and epidemiology
Rapid Assessment of Avoidable Blindness Report: China, Yunnan, Kunming (2006)
A report including output of standardised analysis of vision and eye health survey data including tables of vision impairment prevalence and service coverage estimate
Rapid Assessment of Avoidable Blindness Report: Senegal, Fatick (2010)
A report including output of standardised analysis of vision and eye health survey data including tables of vision impairment prevalence and service coverage estimate
Rapid Assessment of Avoidable Blindness Report: China, Yunnan, Jianchuan (2012)
A report including output of standardised analysis of vision and eye health survey data including tables of vision impairment prevalence and service coverage estimate
Rapid Assessment of Avoidable Blindness Report: Guatemala (2015)
A report including output of standardised analysis of vision and eye health survey data including tables of vision impairment prevalence and service coverage estimate