8 research outputs found
The market valuation effects of the Financial Institutions Reform, Recovery and Enforcement Act of 1989
Appendix A. Species-specific occupancy analysis results.
Species-specific occupancy analysis results
Appendix C. Naïve estimates of occupancy with false positives.
Naïve estimates of occupancy with false positives
Appendix B. Royle and Link (2006) misclassification model results.
Royle and Link (2006) misclassification model results
Appendix A. Description of species playlists used in the experiment.
Description of species playlists used in the experiment
Supplement 1. R code and data to run spatial mark–resight model for raccoon camera trap and telemetry data.
File List
Raccoon_data.R: R list object with following slots
yknown: 3-dimensional array with individual photographic encounter histories (counts) of all tagged and radio-collared individuals (rows) at each camera (columns) and each sampling period (3rd dimension)
mi: vector with total number of photos of marked individuals that could be identified to individual level for each sampling period
M: size of the augmented data set
collar: vector of length M with “TRUE” for individuals with radio-collars and “FALSE” for individuals without collars, tagged or unmarked
$locs: list of length sum(collar) with 2-dimensional matrices containing X and Y coordinates of radio telemetry locations for each of the collard individuals
SSp.dbf, SSp.shp, SSp.shx: Shapefile with outline of South Core Banks (which comprises the state-space for the raccoon analysis)
Rscript_Raccoons.R: R code to load data and run raccoon analysis
MCMC_algorithm.txt: R code for MCMC algorithm for spatial mark-resight analysis of raccoon data
Description
Data files and code are set up to repeat the spatial mark–resight analysis of raccoon camera trapping and telemetry data from South Core Bank, NC, as presented in the Application example in the manuscript.
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Appendix A. Detailed description of the Metropolis-within-Gibbs MCMC sampler for a spatial mark-resight model augmented with telemetry location data and with individual identi cation rate of marks < 100 %.
Detailed description of the Metropolis-within-Gibbs MCMC sampler for a spatial mark-resight model augmented with telemetry location data and with individual identi cation rate of marks < 100 %
