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20 Nematode Coding GFF files
No full text<p>Data for PhD thesis on "Next-generation Nematode Genomes" Sujai Kumar</p>
<p>This file has 20 GFF files for 20 nematode genomes, each with protein-coding genes, tRNA genes, LSU/SSU, and Rfam scan features</p>
<p>Each protein coding GFF feature also has a Coding_Name= attribute with the name of the parent protein/transcript</p>
<p>Original data from WormBase (WS230) and <a href="http://nematod.es">http://nematod.es</a></p>
<p> </p
20 Nematode Genomes - Part 3
No full text<p>Data for PhD thesis on "Next-generation Nematode Genomes" Sujai Kumar </p>
<p>This tgz file is Part 1 of 20 Nematode genome nucleotide fasta files.</p>
<p>The original files were obtained from WormBase (WS230),<a href="http://nematod.es%2C/">http://nematod.es,</a> and <a href="http://www.inra.fr/meloidogyne_incognita/genomic_resources">www.inra.fr/meloidogyne_incognita/genomic_resources</a></p>
<p>The fasta files have been cleaned up:</p>
<p>a) multi-line sequences have been converted to single line</p>
<p>b) sequence IDs have been prefixed with a species abbreviation:</p>
<p>Strongyloides ratti (sr)</p>
<p>Bursaphelenchus xylophilus (bx)</p>
<p>Meloidogyne hapla (mh)</p>
<p>Ascaris suum (as)</p>
<p>Brugia malayi (bm)</p>
<p>Litomosoides sigmodontis (ls)</p>
<p>Acanthocheilonema viteae (av)</p>
<p>Dirofilaria immitis (di)</p>
<p>Trichinella spiralis (ts)</p
20 Nematode Genomes - Part 1
No full text<p>Data for PhD thesis on "Next-generation Nematode Genomes" Sujai Kumar </p>
<p>This tgz file is Part 1 of 20 Nematode genome nucleotide fasta files.</p>
<p>The original files were obtained from WormBase (WS230),<a href="http://nematod.es%2C/">http://nematod.es,</a> and <a href="http://www.inra.fr/meloidogyne_incognita/genomic_resources">www.inra.fr/meloidogyne_incognita/genomic_resources</a></p>
<p>The fasta files have been cleaned up:</p>
<p>a) multi-line sequences have been converted to single line</p>
<p>b) sequence IDs have been prefixed with a species abbreviation:</p>
<p>Strongyloides ratti (sr)</p>
<p>Bursaphelenchus xylophilus (bx)</p>
<p>Meloidogyne hapla (mh)</p>
<p>Ascaris suum (as)</p>
<p>Brugia malayi (bm)</p>
<p>Litomosoides sigmodontis (ls)</p>
<p>Acanthocheilonema viteae (av)</p>
<p>Dirofilaria immitis (di)</p>
<p>Trichinella spiralis (ts)</p
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