1,524 research outputs found
PhD Thesis Chapter 2: Example dataset for use with R script
No full textDanielle Stringer PhD thesis Chapter 2: Development and evaluation of a custom bait design based on 469 single-copy protein-coding genes for exon capture of isopods (Philosciidae: Haloniscus).Example dataset for use with R script (Supplementary File S4).</div
PhD Thesis Chapter 2: Bait design
No full textDanielle Stringer PhD thesis Chapter 2: Development and evaluation of a custom bait design based on 469 single-copy protein-coding genes for exon capture of isopods (Philosciidae: Haloniscus). Final bait sequences generated using BaitFisher v1.2.7 and BaitFilter v1.0.4.</div
Peer Interview Script, Danielle Mitchell, Spring 2020
No full textDanielle Mitchell is a rising senior from Compton, California majoring in anthropology and sociology. She is a gifted writer who conducted very special interviews in SIS Seminar
In the Garden, Danielle Mitchell, Spring 2020
No full textDanielle Mitchell is a rising senior from Compton, California majoring in anthropology and sociology. She is a gifted writer who conducted very special interviews in SIS Seminar
Hall Street, Danielle Mitchell, Spring 2020
No full textDanielle Mitchell is a rising senior from Compton, California majoring in anthropology and sociology. She is a gifted writer who conducted very special interviews in SIS Seminar
PhD Thesis Chapter 2: Isopod transcriptomes
No full textDanielle Stringer PhD thesis Chapter 2: Development and evaluation of a custom bait design based on 469 single-copy protein-coding genes for exon capture of isopods (Philosciidae: Haloniscus).Six assembled isopod transcriptomes used in orthology assignment: Haloniscus sp., Paraplatyarthrus sp., Paraplatyarthrus subterraneus, Porcellionides pruinosus, Armadillidium vulgare, and Ceratothoa sp.</div
PhD Thesis Chapter 2: 469 orthologous groups (nucleotide alignments)
No full textDanielle Stringer PhD thesis Chapter 2: Development and evaluation of a custom bait design based on 469 single-copy protein-coding genes for exon capture of isopods (Philosciidae: Haloniscus).Final set of 469 orthologous groups selected after filtering with MARE v0.1.2-rc for putative phylogenetic informativeness.</div
PhD Thesis Chapter 2: MARE information content results
No full textDanielle Stringer PhD thesis Chapter 2: Development and evaluation of a custom bait design based on 469 single-copy protein-coding genes for exon capture of isopods (Philosciidae: Haloniscus).Results from the MARE v0.1.2-rc analysis. Files include an Excel spreadsheet containing the information content for each orthologous group as well as a matrix figure (along with an associated legend) detailing the results.</div
PhD Thesis Chapter 2, Fig. S3: Sequencing depth summaries
No full textDanielle Stringer PhD thesis Chapter 2: Development and evaluation of a custom bait design based on 469 single-copy protein-coding genes for exon capture of isopods (Philosciidae: Haloniscus).Figure S3: Sequencing depth summaries for all 469 targeted orthologues, and samples. Each page shows on orthologue and the sequencing depth results for all taxa. Vertical lines indicate intron positions.</div
Excerpts of Interviews with Peers, Danielle Mitchell, Spring 2020
No full textDanielle Mitchell is a rising senior from Compton, California majoring in anthropology and sociology. She is a gifted writer who conducted very special interviews in SIS Seminar
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