36 research outputs found

    College of Engineering Drexel E-Repository and Archive (iDEA)

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    www.library.drexel.edu The following item is made available as a courtesy to scholars by the author(s) and Drexel University Library and may contain materials and content, including computer code and tags, artwork, text, graphics, images, and illustrations (Material) which may be protected by copyright law. Unless otherwise noted, the Material is made available for non profit and educational purposes, such as research, teaching and private study. For these limited purposes, you may reproduce (print, download or make copies) the Material without prior permission. All copies must include any copyright notice originally included with the Material. You must seek permission from the authors or copyright owners for all uses that are not allowed by fair use and other provisions of the U.S. Copyright Law. The responsibility for making an independent legal assessment and securing any necessary permission rests with persons desiring to reproduce or use the Material. Please direct questions to [email protected] F M Sasoglu, A J Bohl and B E Layton Microbeam array for nN force measurement Design and microfabrication a high-aspect-ratio PDMS microbeam array for parallel nanonewton force measurement and protein printin

    Towards a method for printing a network of chick forebrain neurons for biosensor applications

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    Paper presented at the 29th Annual International Conference of IEEE-EMBS, Engineering in Medicine and Biology Society, EMBC'07, Lyon, France.The primary goal of this work is to establish a robust, repeatable method for printing arrays of neurons. This work has two endpoints. One is to use a neural array as an experimental testbed for investigating neuronal cell growth hypotheses. The other endpoint is to enable the next generation of cell-based sensors. Herein we compare microcontact printing results previously published by our group with a new method of dip-pen printing. We present preliminary results for neurons growing on these microprinted arrays, assessing contact frequencies and growth characteristics

    Microfabrication procedure of PDMS microbeam array using photolithography for laminin printing and piconewton force transduction on axons

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    Paper presented at 28th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBS), New York, NY: Aug 30 - Sept 3, 2006.The purpose of this paper is to introduce our design for transducing forces on the order of tens of piconewtons by optically measuring deflection of a microfabricated beam tip as it pulls on an array of flexible structures such as axons in an array of lamininprinted neurons. To achieve this we have designed polymeric beams with spring constants on the order of 10pN/μm. We have fabricated circular microbeams with Sylgard® polydimethylsiloxane (PDMS). The elastic modulus of PDMS was determined experimentally using a microscale and a micrometer at different concentrations of curing agent and base agent and found to be on the order of 100kPa. The designed geometry is a 100x100 tapered microcone array with each beam having a length of 100μm, and a base diameter of 10 μm. A SU-8 negative photoresist is etched using photolithography and used as a mold for PDMS soft lithography. PDMS was injected into the mold and the array peeled from the mold

    Design and microfabrication of a high-aspect-ratio PDMS microbeam array for parallel nanonewton force measurement and protein printing

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    Journal of Micromechanics and Microengineering, 17(3): pp. 623-632.Cell and protein mechanics has applications ranging from cellular development to tissue engineering. Techniques such as magnetic tweezers, optic tweezers, and atomic force microscopy have been used to measure cell deformation forces on the order of piconewtons to nanonewtons. In this study, an array of polymeric polydimethylsiloxane (PDMS) microbeams with diameters of 10-40μm and lengths of 118μm was fabricated from Sylgard® with curing agent concentrations ranging from 5% to 20%. Resulting spring constants were 100-300nN/μm. The elastic modulus of PDMS was determined experimentally at different curing agent concentrations and found to be 346kPa to 704kPa in a millimeter-scale array and ~1MPa in a microbeam array. Additionally, the microbeam array was used to print laminin for the purpose of cell adhesion. Linear and non-linear finite element analyses are presented and compared to the closed-from solution. Conclusion: The highly compliant, transparent, biocompatible PDMS may offer a method for more rapid throughput in cell and protein mechanics force measurement experiments with sensitivities necessary for highly compliant structures such as axons

    In vitro evaluation of the apoptotic, autophagic, and necrotic molecular pathways of fluoride

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    Taşpınar, Mehmet ( Aksaray, Yazar )The original version of this article unfortunately contained mistakes. The complete list of corrections is given below. & The author’s affiliations in now corrected in the author group. & The correct order of the keywords should be: Apoptosis, Autophagy, In vitro, Naf, Necrosis, NRK-52E cell line & p.2, fourth sentence of the last paragraph under the header “Total RNA Isolation and Quantitative Real-Time PCR”, BCt should be CT & p.3, second sentence of the first paragraph under the Results section, results should be PCR results & The correct bibliographic information for reference [1] should be Yur F, Mert N, Dede S, Değer Y, Ertekin A, Mert H, Yaşar S, Doğan I, Işık A (2013) Evaluation of serum lipid fractions and tissue antioxidant levels in sheep with fluorosis. Fluoride 46(2):90–9

    Discrete-item inventory control involving fixed setup costs, demand censoring, and ambiguity

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    We investigate a dynamic inventory control problem involving fixed setup costs and lost sales. Considering ambiguity, even the demand distribution fequiv(f(d))d=0,1,...fequiv (f(d))_{d=0,1,...} itself, out of which random realizations are sampled, can come from a vast and definitely non-singleton set. Lost sales and demand ambiguity would together complicate the problem through censoring, namely, the inability of the firm to observe the lost portion of the demand. Our main policy idea advocates periodically ordering up to seemingly inadvisable high levels just to learn and in intervening periods, cleverly exploiting the information gained in these learning periods. By regret, we mean the price paid for ambiguity in long-run average performances. %The bulk of our efforts are devoted to the case where no known bound is known for realized demand levels. When demand has finite support, we can accomplish a regret bound in the order of mathcalO(T2/3cdot(lnT)1/2)mathcal{O}(T^{2/3}cdot (ln T)^{1/2}) which almost matches a known lower bound as long as inventory costs are genuinely convex. Major policy adjustments are warranted for the more complex case involving unbounded demand support, for which our regret bound is in the order of mathcalO(T8/9)mathcal{O}(T^{8/9}). We find it necessary to separately treat the situation where f(0)f(0) gets arbitrarily close to one, and mathcalO(T(2+sqrt2)/4)simeqmathcalO(T0.854)mathcal{O}(T^{(2+sqrt{2})/4})simeq mathcal{O}(T^{0.854}) can be established if the firm is allowed to remove items --with immediate cost-- from the inventory. We also propose other policies based on the general learning-while-doing idea using the Kaplan-Meier (KM) estimator. Our simulation demonstrates the merits of the various policy ideas and the hurdles posed by the prospect of f(0)longrightarrow1f(0)longrightarrow 1^-.Ph.D.Includes bibliographical reference

    Clinical predictors of incipient vertebral fractures and bone mineral density in kidney transplant patients

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    © 2022, The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.Purpose: Kidney transplant recipients are prone to metabolic bone diseases and consequent fractures. This study aimed to evaluate the incidence of incipient vertebral fractures, osteopenia, osteoporosis, and the clinical factors associated with incipient vertebral fractures in a group of kidney transplant patients. Methods: Two hundred sixty-four patients (F/M 124/140, 45.3 ± 13 years) who had undergone kidney transplantation in tertiary care centers were included. Vertebral fractures were assessed semiquantitatively using conventional thoracolumbar lateral radiography in 202 of the patients. Results: Vertebral fractures were observed in 56.4% (n = 114) of the study group. The frequency of osteoporosis was 20.0% (53 of 264 patients), and osteopenia was 35.6% (94 of 264 patients). Bone mineral density (BMD) levels were in the normal range in 40.3% (n = 46) of the subjects with vertebral fractures. It was in the osteoporotic range in 20.1% (n = 23) and the osteopenic range in 40.3% (n = 46). Vertebral fractures were associated with age, duration of hemodialysis, BMI, and femoral neck Z score (R2 37.8%, p = 0.027). Conclusion: As incipient vertebral fractures can be observed in patients with normal BMD levels in kidney transplant recipients, conventional X-ray screening for vertebral fractures may be beneficial for a proper therapy decision of metabolic bone disease in kidney transplant recipients

    The association of CMV infection with bacterial and fungal infections in hematopoietic stem cell transplant recipients: A retrospective single center study

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    This study aims to evaluate the probable association between CMV infection and bacterial or fungal infections in 91 consecutive adult patients who underwent autologous or allogeneic HSCT within a period of two years.Medical records of the patients were retrospectively reviewed. Blood cultures were evaluated by automated blood culture system. A quantitative real-time polymerase chain reaction was performed to detect CMV DNA.CMV infection and CMV disease were detected in 42 (46%) ADDIN EN.CITE <EndNote><Cite><Author>Ng</Author><Year>2005</Year><RecNum>191</RecNum><DisplayText>(Ng<style face="italic"> et al., </style>2005)</DisplayText><record><rec-number>191</rec-number><foreign-keys><key app="EN" db-id="a20etv5e6ade0berxf1vw5vp0apvfptetwwd" timestamp="1639991687">191</key></foreign-keys><ref-type name="Journal Article">17</ref-type><contributors><authors><author>Ng, A. P.</author><author>Worth, L.</author><author>Chen, L.</author><author>Seymour, J. F.</author><author>Prince, H. M.</author><author>Slavin, M.</author><author>Thursky, K.</author></authors></contributors><titles><title>Cytomegalovirus DNAemia and disease: incidence, natural history and management in settings other than allogeneic stem cell transplantation</title><secondary-title>Haematologica</secondary-title></titles><periodical><full-title>Haematologica</full-title></periodical><pages>1672-1679</pages><volume>90</volume><number>12</number><dates><year>2005</year><pub-dates><date>Dec</date></pub-dates></dates><isbn>0390-6078</isbn><accession-num>WOS:000506833800012</accession-num><urls><related-urls><url><Go to ISI>://WOS:000506833800012</url></related-urls></urls></record></Cite></EndNote>(Ng et al., 2005) and six (6.6%) patients, respectively. Of the 158 microorganisms isolated, 115 (73%) were Gram-positive bacteria. Bacteremia and fungemia developed in 55 (60%) and eight (8%) patients, respectively. Concurrent CMV infection and bacteremia were detected in 17 (18.7%) patients and concurrent CMV infection and fungal infection were detected in five (5.5%) patients. Graft versus host disease (GVHD) developed in 15 (50%) allogeneic HSCT recipients and two (2.2%) autologous HSCT recipients. Twenty-one (23%) patients including 13 (43%) allogeneic and eight (13%) autologous HSCT recipients died.The most common infection is bacteremia, and it develops concurrently with CMV infection in approximately one-fifth of HSCT recipients. Gram-positive bacteria are more common in bacteremia. Further studies on the follow-up and treatment of infections after HSCT will improve survival rates post-HSCT
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