1,721,033 research outputs found

    PCA fitter CMSSW version for L! track Finding

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    PCA fitter integrated into CMSSW (CMS Offline Software

    MoKa

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    Accurate pKa prediction and automatic structure modification is critical for many computational chemistry methods which are strongly dependent on the tautomerization and protonation state of the structures, including docking, binding affinity estimation, QSAR and ADME modelling, and metabolism prediction. MoKa implements a novel approach [1] for in-silico computation of pKa values; trained using a very diverse set of more than 25000 pKa values, it provides accurate and fast calculations using an algorithm based on descriptors derived from GRID molecular interaction fields

    Kibitzer

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    an automatic and expert tool to expand the MoKa internal database with a corporate database of pKa value

    liblogd

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    a library for logD and logP predictio

    fixpdb

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    A compiutational procedure for filtering PDB files based also on a PDB residues dictionar

    MoKaBio

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    in-silico computation of proteins pKa values by environment similarit

    libtaut/tauthor

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    A computational procedure for the enumeration of tautomers and the estimation of their stability in the aqueous medium solution
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