1,721,137 research outputs found
Gene ontology mapping to DH pahang reference genome v2
No full textGene ontology mapping to DH pahang reference genome v2 using TrEMBL databas
Gene ontology mapping to DH pahang reference genome v2
No full textGene ontology mapping to DH pahang reference genome v2 using TrEMBL databas
SNP dataset in musa acuminata (banana) panel
No full textFiltered SNP dataset used to perform GWAS on banan
SNP dataset in musa acuminata (banana) panel
No full textFiltered SNP dataset used to perform GWAS on banan
Genotyping of Musa accessions from ITC by DArT markers
No full textGenotyping results obtained with DArT markers for Musa accessions from the ITC. Dataset published in Sardos et al. 2016, plus additional non published data
Multi-fasta file of GRAS Transcription Factors in Angiosperms
No full textGRAS transcription factors (TFs) play critical roles in plant growth and development such as gibberellin and mycorrhizal signaling. We could identify 17 subfamilies for which names were homogenized based on a literature review and described 5 new subfamilies (DLT, RAD1, RAM1, SCLA, and SCLB). This study establishes a consistent framework for the classification of GRAS members in angiosperm species, and thereby a tool to correctly establish the orthologous relationships of GRAS genes in most of the food crops in order to facilitate any subsequent functional analyses in the GRAS gene family. The multi-fasta file containing all the sequences used in our study can be used as database to perform diagnostic BLASTp to classify GRAS genes from other non-model specie
Banana triploid cultivars under osmotic stress conditions
No full textDifferent banana (Musa spp.) genotypes, composed of auto and allo-triploids, were phenotypically evaluated according to their performance in an in vitro osmotic stress test (5% PEG treatment for 21 days
Multi-fasta file of GRAS Transcription Factors in Angiosperms
No full textGRAS transcription factors (TFs) play critical roles in plant growth and development such as gibberellin and mycorrhizal signaling. We could identify 17 subfamilies for which names were homogenized based on a literature review and described 5 new subfamilies (DLT, RAD1, RAM1, SCLA, and SCLB). This study establishes a consistent framework for the classification of GRAS members in angiosperm species, and thereby a tool to correctly establish the orthologous relationships of GRAS genes in most of the food crops in order to facilitate any subsequent functional analyses in the GRAS gene family. The multi-fasta file containing all the sequences used in our study can be used as database to perform diagnostic BLASTp to classify GRAS genes from other non-model specie
SSR characterization of the global Musa germplasm collection (ITC)
No full textFor the SSR analysis, the pipeline established by Christelová et al. (2011) was used. Briefly, 19 SSR loci (Lagoda et al. 1998; Crouch et al. 1998; Hippolyte et al. 2010) that are well distributed across ten of the eleven Musa genetic linkage groups (Hippolyte et al. 2010) were amplified using a set of M13–tailed specific primers to allow universal labelling with fluorescent dyes
Banana triploid cultivars under osmotic stress conditions
No full textDifferent banana (Musa spp.) genotypes, composed of auto and allo-triploids, were phenotypically evaluated according to their performance in an in vitro osmotic stress test (5% PEG treatment for 21 days
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