23 research outputs found
RatDems-GENEPOP-POP NAMES-PL8sep
No full textPopulation names for the Genepop file of rat microsatellite genotypes
RatDemographics-GENECLASS-PL8sep
No full textGenotype data from 146 trapped individuals formatted for Geneclass, with animals grouped by sampling site with Pau da Lima site 8 separated by sampling year (clustering analyses indicated the site does not show stable genetic patterns). "RatDemographics" or "RatDems" refers to the excel sheet this file was made from in CREATE. The original excel sheet has demographic data on rat age and sex
RatDems-Clusters-LDNE
No full textGenotype data from trapped individuals formatted for LDNe, with animals grouped by structure clusters. "RatDemographics" or "RatDems" refers to the excel sheet this file was made from in CREATE. The original excel sheet has demographic data on rat age and sex. Juveniles have been removed from datasets used in Ne analyses
RatDems-House16-ML-RELATE
No full textGenotype data from trapped individuals formatted for ML-Relate. Only animals captured in House 16 in Pau da Lima are included in this file to test for pairwise relatedness within the household. "RatDemographics" or "RatDems" refers to the excel sheet this file was made from in CREATE. The original excel sheet has demographic data on rat age and sex
RatDems-House5-ML-RELATE
No full textGenotype data from trapped individuals formatted for ML-Relate. Only animals captured in House 5 in Pau da Lima are included in this file to test for pairwise relatedness within the household. "RatDemographics" or "RatDems" refers to the excel sheet this file was made from in CREATE. The original excel sheet has demographic data on rat age and sex
Cluster1RatMsatIBD
No full textMatrices of pairwise Fst and distance in meters between sites in Pau da Lima with site 8 separated into two populations based on sampling year for use in Genepop to perform Mantel tests of isolation by distance (IBD)
RatDemographics-ARLEQUIN-PL8sep
No full textGenotype data from 146 trapped individuals formatted for Arlequin, with animals grouped by sampling site with Pau da Lima site 8 separated by sampling year (clustering analyses indicated the site does not show stable genetic patterns). "RatDemographics" refers to the excel sheet this file was made from in CREATE. The original excel sheet has demographic data on rat age and sex
RatDems-ML-RELATE-PL2-V2
No full textGenotype data from trapped individuals formatted for ML-Relate. Only animals captured in site 2 in Pau da Lima (valley 2) are included in this file to test for pairwise relatedness within the site. "RatDemographics" or "RatDems" refers to the excel sheet this file was made from in CREATE. The original excel sheet has demographic data on rat age and sex
RatDems-ML-RELATE-SA3-V5
No full textGenotype data from trapped individuals formatted for ML-Relate. Only animals captured in site 3 in Sete de Abril (valley 5) are included in this file to test for pairwise relatedness within the site. "RatDemographics" or "RatDems" refers to the excel sheet this file was made from in CREATE. The original excel sheet has demographic data on rat age and sex
RatMsat17LociClean-STRUCTURE
No full textGenotype data from 146 trapped individuals formatted for STRUCTURE, with animals grouped by sampling site and year. "RatDemographics" or "RatDems" refers to the excel sheet this file was made from in CREATE. The original excel sheet has demographic data on rat age and sex
