129,537 research outputs found
bio-guoda/preston: 0.5.5
Features
n/a
Improvements
add support for recently introduced GBIF index tsv stream; https://github.com/bio-guoda/preston/issues/224
Bugs
make preston append append again https://github.com/bio-guoda/preston/issues/226
remove blanks from preston alias https://github.com/bio-guoda/preston/issues/22
bio-guoda/preston: 0.5.4
Features
n/a
Improvements
do not log expected stop processing exception on preston head cmd
attempt to work towards more lenient dependency traversal
Bugs
re-enable clone command #22
bio-guoda/preston: 0.8.5
<h2>Features</h2>
<ul>
<li><a href="https://github.com/bio-guoda/preston/commit/ded8404468b92fd47c0815fa6370ef51c32de3b6">towards tracking of Zotero literature groups; related to</a> https://github.com/bio-guoda/preston/issues/281 @myrmoteras @ajacsherman
example usage:</li>
</ul>
<pre><code>ZOTERO_TOKEN=[SECRET] preston track https://www.zotero.org/groups/5435545/bat_literature_project
</code></pre>
<p>For more usage examples, see [1], https://github.com/bat-literature/bat-literature.github.io and https://bat-literature.github.io .</p>
<ul>
<li><a href="https://github.com/bio-guoda/preston/commit/ecd2ffd1e89e632ff15b091abc27fdab6c9555b2">towards supporting google drive resource tracking; related to</a> https://github.com/bio-guoda/preston/issues/284</li>
</ul>
<p>Example usage to track and copy pdf associated with a google doc with provenance data stored in <code>data/</code> folder:</p>
<pre><code>preston track "https://docs.google.com/document/d/1LMnC0lUw_DGIQV5Pa4lZhe_7-SIR-otgHSHDNkAwD7Q/edit"\
| grep pdf\
| grep hasVersion\
| preston cat\
> doc.pdf
</code></pre>
<h2>Improvements</h2>
<ul>
<li>implement workaround in consistent TaxonWorks API endpoint https://github.com/SpeciesFileGroup/taxonworks/issues/3940 @mjy . Also see [2] .</li>
</ul>
<h2>Bugs</h2>
<p>n/a</p>
<h2>References</h2>
<p>[1] Sherman AC et al. (2024) Bat Literature Corpus v0.1. https://github.com/bat-literature/bat-literature.github.io https://bat-literature.github.io https://linker.bio/hash://sha256/6ba3d79cf1fd6349012cb4e527b6727b3e41e140489fa9c02f132e2cdd88d189</p>
<p>[2] Poelen, J. H. (2024). A biodiversity dataset graph: Biological Associations in TaxonWorks hash://sha256/e4a47c067d6c125da60c9a1b92b5eecdea539cb8666cd3aed99db347ae5b8ed0 hash://md5/686007de79cc2a49ab23fd3debe56e3f (0.3) [Data set]. Zenodo. https://doi.org/10.5281/zenodo.11151783</p>
[Letter from Preston E. Harrison, M.D. to T. N. Carswell]
A letter written to Mr. T. N. Carswell, Abilene, Texas from Preston E. Harrison, M.D., Superintndent, Big Spring State Hospital. Advisement sent for Carswell's records regarding admission date of Byrdie Pearl Carswell on February 16, 1961 and furlough taken on September 10, 1963
[Letter from Lieutenant Governor Preston Smith to T. N. Carswell - November 30, 1967]
A letter written to Mr. T. N. Carswell, Abilene, Texas, from Preston Smith, Lieutenant Governor, Austin, Texas, dated November 30, 1967. An invitation issued to Carswell, his family and his friends "to discuss any problems confronting our State" at a coffee in Abilene at the Downtowner Motor Inn in the Crystal Room
bio-guoda/preston: 0.7.6
<h2>Features</h2>
<ul>
<li>n/a</li>
</ul>
<h2>Improvements</h2>
<ul>
<li>support post 2023-10-13 Zenodo API https://github.com/bio-guoda/preston/issues/266 thanks to @slint for providing pointers to use the new API.</li>
</ul>
<h2>Bugs</h2>
<ul>
<li>n/a</li>
</ul>
[Letter from Governor Preston Smith to T. N. Carswell - March 14, 1972]
A letter written to Mr. T. N. Carswell, Abilene, Texas, from Preston Smith, Governor of Texas, dated March 14, 1972. Smith acknowledges his receipt of the letter from Carswell regarding his views concerning the possibility of a referendum on school busing in Texas. He advises that the referendum on school busing in Texas has been placed on the primary election ballots, but the presidential candidates referendum was not placed on the ballot
Management of trifluralin resistance in annual ryegrass (Lolium rigidum Gaudin) in southern Australia
Peter Boutsalis, Christopher Preston and John Brosterhttp://www.weedinfo.com.au/bk_15awc.htm
bio-guoda/preston: 0.8.0
<h2>Features</h2>
<ul>
<li>initial pass at support for streaming TaxoDros DROS5.TEXT records in jsonl #275 fyi @myrmoteras @slint</li>
</ul>
<p>Example - select first DROS5.TEXT literature record from Bächli, G. (2024)</p>
<pre><code>preston ls\
--anchor hash://sha256/ee72b70df451082289193cdd8ff420495b3a24d230880613f9adddc71380fee6\
--remote https://linker.bio\
| preston taxodros-stream\
--remote https://linker.bio\
| head -n1 | jq .
</code></pre>
<p>produces:</p>
<pre><code>{
"id": "abd el-halim et al., 2005",
"authors": "Abd El-Halim, A.S., Mostafa, A.A., & Allam, K.A.M.a.,",
"year": "2005",
"title": "Dipterous flies species and their densities in fourteen Egyptian governorates.",
"journal": "J. Egypt. Soc. Parasitol., 35:351-362.",
"method": "ocr",
"filename": "Abd El-Halim et al., 2005M.pdf",
"http://www.w3.org/ns/prov#wasDerivedFrom": "line:hash://sha256/6cf7b4e856bce735b7e687d7cb76210a567d2e7f2e58d779a41cde75f05c9fd3!/L1-L10",
"http://www.w3.org/1999/02/22-rdf-syntax-ns#type": "taxodros-flatfile"
}
</code></pre>
<h2>Improvements</h2>
<ul>
<li>enable line selection in text files with Mac line endings #276 to enable</li>
</ul>
<pre><code>preston cat\
'line:hash://sha256/6cf7b4e856bce735b7e687d7cb76210a567d2e7f2e58d779a41cde75f05c9fd3!/L1-L10'\
--remote https://linker.bio,https://softwareheritage.org\
| tr '\t' '\n'
</code></pre>
<p>producing</p>
<pre><code>.TEXT;
abd el-halim et al., 2005
.A Abd El-Halim, A.S., Mostafa, A.A.,
& Allam, K.A.M.a.,
.J 2005
.S Dipterous flies species and their densities in
fourteen Egyptian governorates.
.Z J. Egypt. Soc. Parasitol., 35:351-362.
.K ocr
.P Abd El-Halim et al., 2005M.pdf
</code></pre>
<p>Similar results can be obtained when requesting -</p>
<p>https://linker.bio/line:hash://sha256/6cf7b4e856bce735b7e687d7cb76210a567d2e7f2e58d779a41cde75f05c9fd3!/L1-L10</p>
<p>in a browser.</p>
<h2>Bugs</h2>
<p>n/a</p>
<h2>References</h2>
<p>Bächli, G. (2024). TaxoDros - The Database on Taxonomy of Drosophilidae hash://md5/d68c923002c43271cee07ba172c67b0b hash://sha256/3e41eec4c91598b8a2de96e1d1ed47d271a7560eb6ef350a17bc67cc61255302 [Data set]. Zenodo. https://doi.org/10.5281/zenodo.10565403</p>
The importance of vegetative seedling traits in distinguishing herbaceous legumes of differing impact in temperate natural ecosystems
Jason Emms, John G. Virtue, Christopher Preston and William D. Bellottihttp://www.weedinfo.com.au/bk_15awc.htm
- …
