7,754 research outputs found

    Early transcriptional response of terpenoid metabolism to Colletotrichum gloeosporioides in a resistant wild strawberry Fragaria nilgerrensis

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    Mehmood, Nasir, Yuan, Yuan, Ali, Mohammed, Ali, Muhammad, Iftikhar, Junaid, Cheng, Chunzhen, Lyu, Meiling, Wu, Binghua (2021): Early transcriptional response of terpenoid metabolism to Colletotrichum gloeosporioides in a resistant wild strawberry Fragaria nilgerrensis. Phytochemistry (112590) 181: 1-12, DOI: 10.1016/j.phytochem.2020.112590, URL: http://dx.doi.org/10.1016/j.phytochem.2020.11259

    Feasibility of Software-Based Duty Cycling of GPS for Trajectory-Based Services

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    Energy-efficient localization is increasingly important for many types of smartphone apps. The research community has argued that fixed duty cycling of GPS is not a good choice for trajectory-based services concerning route accuracy. In this paper, we describe the design and implementation of a highly accurate map matching and path construction algorithm. Furthermore, with thorough field experiments, we show that fixed duty cycling of a smartphone GPS receiver is a feasible approach for trajectory-based services, and it can achieve considerable energy conservation without sacrificing much route accuracy. When increasing the GPS sampling period beyond 120 seconds, it saves at least 78% energy in comparison to continuous GPS sampling, while the loss of route accuracy tends to be stable around 23%.Li, Xiaohan, Yuan, Fengpeng, & Lindqvist, Janne. (2016). Feasibility of Software-Based Duty Cycling of GPS for Trajectory-Based Services. In Proceedings of Consumer Communications & Networking Conference (CCNC2016-EdgeCom), Las Vegas, NV. http://ieeexplore.ieee.org/xpl/conhome.jsp?reload=true&punumber=1001153Peer reviewe

    Tian guo hua yuan

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    安徒生原著 ; 蔡慧冰改寫 ; 陳楠舟插圖.改寫自Andersen的Paradisets have.Antusheng yuan zhu ; Cai Huibing gai xie ; Chen Nanzhou cha tu

    Raw data for Yuan et al., 2023, litter CNP concentration, JOE

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    Raw data for Yuan et al., 2023, Plant litter initial concentrations of C, N, and P. Any use of the dataset please email to the corresponding author at [email protected].</p

    Fig. 4 in Early transcriptional response of terpenoid metabolism to Colletotrichum gloeosporioides in a resistant wild strawberry Fragaria nilgerrensis

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    Fig. 4. Schematic illustration of general terpenoid biosynthesis pathways showing identified unigenes from F. nilgerrensis leaf transcriptome data. The interconvertible precursors IPP and DMAPP, two phosphorylated C5 unites, are produced by the MVA and MEP pathways which are exchangeable from both compartmentations. The chloroplast is a major site for synthesis of hemiterpene (C5), monoterpenoids (C10), diterpenoids (C20) carotenoids (C40) and chlorophyll, while the cytosol and other organelle are responsible for synthesis of monoterpenoids (C10), sesquiterpene (C15) and triterpene (C30). But that is not strictly conclusive. Arrow with lines indicate reactions catalyzed by enzymes and the encoding genes, with unigenes identified in this experiment boxed. The color highlights are for better visualization. Abbreviations: AACT, acetoacetyl-CoA thiolase; CMK, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; DXR, 1-deoxy-D-xylulose 5-phosphate reductase; DXS, 1-deoxy-D-xylulose 5-phosphate synthase; HDR, (E)-4-hydroxy-3-methyl-but-2-enyl diphosphate reductase; HDS, (E)-4-hydroxy-3- methyl-but-2-enyl diphosphate synthase; HMGR, 3-hydroxy-3-methylglutaryl-CoA reductase; HMGS, 3-hydroxy-3-methylglutaryl-CoA synthase; IDI, isopentenyl diphosphate isomerase; MCT, MEP cytidyltransferase; MDC, mevalonate-5-diphosphate decarboxylase; MDS, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; MVK, mevalonate kinase. (For interpretation of the references to color in this figure legend, the reader is referred to the Web version of this article.)Published as part of Mehmood, Nasir, Yuan, Yuan, Ali, Mohammed, Ali, Muhammad, Iftikhar, Junaid, Cheng, Chunzhen, Lyu, Meiling & Wu, Binghua, 2021, Early transcriptional response of terpenoid metabolism to Colletotrichum gloeosporioides in a resistant wild strawberry Fragaria nilgerrensis, pp. 1-12 in Phytochemistry (112590) 181 on page 7, DOI: 10.1016/j.phytochem.2020.112590, http://zenodo.org/record/829067

    Fig. 7 in Early transcriptional response of terpenoid metabolism to Colletotrichum gloeosporioides in a resistant wild strawberry Fragaria nilgerrensis

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    Fig. 7. Phylogenetic relationship of the five FnTPS candidates with other known terpene synthases and a sequence alignment showing the conserved protein motifs. (A) A maximum-likelihood tree of the TPS proteins depicting the TPS-a, TPS-b, TPS-d, TPS-e/f, and TPS-g clades, with bootstrap values greater than 50% shown for the branching. The scale bar corresponds to 6% amino acid substitution. The five F. nilgerrensis proteins are in red. Selected proteins with available three-dimensional structural data are shown in bold using their PDB code followed by the abbreviated species name. The known enzymatic products are in light blue followed with the UniProt Accession numbers of the proteins. (B) Alignment of the five candidates FnTPSs with α-farnesene synthase from apple (Malus domestica) and α-bergamotene synthase from Lavender (Lavandula Angustifolia). The DxDD motif of typical class II terpene synthases in FnTPS6 is boxed and the highly conserved class I DDxxD as well as the lesser conserved RRx8W and NSE/DTE motifs are indicated. The color regime of amino acids is set in Bioedit version 7.2.6. (For interpretation of the references to color in this figure legend, the reader is referred to the Web version of this article.)Published as part of Mehmood, Nasir, Yuan, Yuan, Ali, Mohammed, Ali, Muhammad, Iftikhar, Junaid, Cheng, Chunzhen, Lyu, Meiling & Wu, Binghua, 2021, Early transcriptional response of terpenoid metabolism to Colletotrichum gloeosporioides in a resistant wild strawberry Fragaria nilgerrensis, pp. 1-12 in Phytochemistry (112590) 181 on page 10, DOI: 10.1016/j.phytochem.2020.112590, http://zenodo.org/record/829067

    Fragaria nilgerrensis leaves

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    4.2. Isolation of phytochemical and volatile compounds from F. nilgerrensis leaves At different hours (0, 3, 6, 12, 18, 24, 48 and 72 h) after infected with C. gloeosporioides, leaves were removed and collected from the plants, frozen immediately in liquid nitrogen and then stored at 80 ◦ C for future use. Each cryopreserved sample was homogenized in liquid nitrogen by using pestle and mortar. One gram of the powdered samples was mixed with 2 ml saturated NaCl in a 20 ml-head-space vial, in which an internal standard (10 μl of 8.08 mg /L 2,6-dimethyl-4-heptanone (cat. Nr. W353701 from Sigma–Aldrich, Shanghai, China) was added. Before subjecting the mixtures for SPME extraction, each vial was heated at 60 ◦ C for 10 min. Subsequently, the headspace of the sample vial was exposed to a 65 μm divinylbenzene/carboxen/polydimethylsilioxan fiber (Supelco, Bellefonte, PA, USA) for 20 min at 60 ◦ C to complete the extraction. Relative abundance of the compounds was quantified by peak area determination and normalized to the mass of the internal standard. We pooled samples from three plants for one biological replication and the experiment was performed twice which gave similar results. Data are shown as mean without significant test in the Results section.Published as part of Mehmood, Nasir, Yuan, Yuan, Ali, Mohammed, Ali, Muhammad, Iftikhar, Junaid, Cheng, Chunzhen, Lyu, Meiling & Wu, Binghua, 2021, Early transcriptional response of terpenoid metabolism to Colletotrichum gloeosporioides in a resistant wild strawberry Fragaria nilgerrensis, pp. 1-12 in Phytochemistry (112590) (112590) 181 on page 7, DOI: 10.1016/j.phytochem.2020.112590, http://zenodo.org/record/829067

    On My Way: Optimizing Driving Routes for Navigation Applications

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    Conventionally, the route recommendations given by GPS navigation applications have been considered as the optimal route search problem only between two locations - origin and destination. Sometimes people want to visit several intermediate locations prior to reaching their final destination. For example, travelers may want to visit a diner and a gas station before arriving at their vacation destination. Although there is likely to be many choices that are available along the route to the destination, only one place from each type should be chosen. Furthermore, in new emerging application domains, such as “physical-world crowdsourcing”, people may want to opportunistically visit some places in order to complete personal or work related tasks. Our work explores a design space where we try to reduce the amount of requests made to third-party map and route data providers. We explore the simple idea of using the Euclidean distance as a rough estimate for the optimal route between destinations with multiple waypoints. Our preliminary results indicate that with over 80% of test cases, this simple Euclidean distance estimator approach gives at least one optimal routing alternative.Yuan, Fengpeng, Song, Xueyuan & Lindqvist, Janne. (2016). On My Way: Optimizing Driving Routes for Navigation Applications. In Proceedings of Consumer Communications & Networking Conference (CCNC2016-EdgeCom), Las Vegas, NV. http://ieeexplore.ieee.org/xpl/conhome.jsp?reload=true&punumber=1001153Peer reviewe

    Introduction to the Song-Yuan-Ming Transition in Chinese History

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    Abridged translation of my \u27Introduction\u27 to The Song-Yuan-Ming Transition in Chinese History by Zhang Yi. -- author-supplied description

    Tunable acoustic attenuation in dilute suspensions of non-spherical magnetic particles

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    The microstructure of suspensions of ferromagnetic particles with subwavelength size can be controlled by an external field, making it possible to develop novel broadband acoustic materials with anisotropic and tunable acoustic properties. In this study we experimentally show that dilute suspensions of nickel micro-flakes exhibit a greater than 20% change in attenuation coefficient at MHz frequencies upon changing the direction of an external magnetic field, at particle volume fractions of only 0.5%. Optical transmission measurements and analysis of the characteristic timescales of particle alignment and chaining are used to study the mechanisms behind this acoustic anisotropy. By making comparison to suspensions of spherical particles, we show that the shape and orientation of the nickel micro-flakes play important roles in the tunable acoustic attenuation of these suspensions.Peer reviewed
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