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    A Regularization Approach to Nonlinear Variable Selection

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    In this paper we consider a regularization approach to variable selection when the regression function depends nonlinearly on a few input variables. The proposed method is based on a regularized least square estimator penalizing large values of the partial derivatives. An efficient iterative procedure is proposed to solve the underlying variational problem, and its convergence is proved. The empirical properties of the obtained estimator are tested both for prediction and variable selection. The algorithm compares favorably to more standard ridge regression and L1 regularization schemes

    A Regularized Method for Selecting Nested Group of Genes from Microarray Data

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    Gene expression analysis aims at identifying the genes able to accurately predict biological parameters like, for example, disease subtyping or progression. While accurate prediction can be achieved by means of many different techniques, gene identification, due to gene correlation and the limited number of available samples, is a much more elusive problem. Small changes in the expression values often produce different gene lists, and solutions which are both sparse and stable are difficult to obtain. We propose a two-stage regularization method able to learn linear models characterized by a high prediction performance. By varying a suitable parameter these linear models allow to trade sparsity for the inclusion of correlated genes and to produce gene lists which are almost perfectly nested. Experimental results on synthetic and microarray data confirm the interesting properties of the proposed method and its potential as a starting point for further biological investigations
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