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    The Distinct Roles That Gln-192 and Glu-217 of Factor Ix Play in Selectivity for Macromolecular Substrates and Inhibitors

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    In this paper, we report functional characterization of positions 192 and 217 (chymotrypsinogen numbering system) in human factor IX and discuss the distinction and similarity of these two sites among the blood coagulation factors. Recombinant factor IXQ192E (residue glutamine at position 192 replaced by glutamic acid), IXQ192K, IXE217D, and IXE217 R proteins exhibited 11%, 46%, 39%, and 2% of the wild-type factor IX's clotting activity, respectively. Binding of these variants to factor VIIIa (FVIIIa) was inefficient compared to that of wild-type factor IX, and the dissociation constants doubled for IXQ192E, 3-fold higher for IXQ192K and 4-fold higher for both IXE217D and IXE217R. In the presence of FVIIIa, all variant factor IX hydrolyzed factor X at the catalytic efficiencies correlating with respective clotting activities. However, FVIIIa greatly enhanced the catalytic efficiency of both IXE217 variants to a greater extent (similar to7 x 10(4)-fold) as compared to its effect on the wild- type factor IXa and the other two IXQ 192 variants [by a factor of (1-2) x 10(4)]. Moreover, while both IXQ192 variants demonstrated small substrate selectivity similar to that of wild-type factor IXa, the selectivity of both IXE217 variants was greatly altered. Mutations at position 192 disturbed the interaction of factor IXa with physiological inhibitors. Although all variants formed an SDS-stable complex with antithrombin III ( ATIII) equally well in the presence of heparin and were readily inhibited by ATIII in the absence of heparin, activated IXQ192K exhibited a slower stable complex formation with ATIII without heparin. On the other hand, only IXQ192E showed decreased interaction with TFPI. Our results demonstrate that positions 192 and 217 play different roles unique to factor IX in specifying the interaction of factor IX with substrates and inhibitors

    Identification of functionally important residues of the epidermal growth factor-2 domain of factor IX by alanine-scanning mutagenesis - Residues Asn(89)-Gly(93) are critical for binding factor VIIIa

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    This paper describes the consequences of alanine-scanning mutagenesis on 28 positions of the second epi-dermal growth factor (EGF-2) domain of factor IX. We identified four positions of Gln 97 , Phe 98 , Tyr 115 , and Leu 117 that are critical for secretion of factor IX. Of the remaining mutations, 4 mutants (V86A, E113A, K122A, and S123A) are as active as wild-type factor IX (IXwt); 16 (D85A, K100A, N101A, D104A, N105A, R116A, E119A, T87A, I90A, K91A, R94A, E96A, S102A, K106A, T112A, and N120A) retain reduced but detectable activity, and 4 (N89A, N92A, G93A, and V107A) are nearly inert in the clotting assay. Both factor XIa and the factor VIIa-tissue factor complex effectively catalyzed the activation of these mutants except N89A. The mutant V107A failed to form the factor tenase complex with factor VIIIa be-cause of a 35-fold increase in Kd . The mutants N89A and N92A did not compete with factor IXwt for factor VIIIa binding, and G93A exhibited a 6-fold increase in Ki val-ues in the competitive binding assay. It appears that mutations at these positions have significantly affected the interaction between factor IX and factor VIIIa, al-though other mutations had little effect on the binding of factor IX to factor VIIIa. Mutations in two regions, Thr 87 –Gly 93 and Asn 101 –Val 107 , significantly increased the Km value of factor IXa (2–10-fold) in cleavage of fac-tor X in the absence of factor VIIIa. In the presence of factor VIIIa, the catalytic efficiency of each mutant to-ward factor X paralleled its clotting activity. Briefly, we propose two relatively distinctive functions of factor IX for two adjacent regions in the EGF-2 domain; the first loop region (residues 89–94) is involved with the binding of its cofactor, factor VIIIa, and the third loop with connected -sheets (residues 102–108) is involved in the proper binding to the substrate, factor X
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