1,721,186 research outputs found

    MOBILITY, MICROSTRUCTURE AND MRI. DTI WITHOUT A DTI BLACK BOX: THE ART OF MAKING DO.

    No full text
    Because of its non invasive nature, NMR is a unique tool for studying the microstrusture of biological and material samples. This is usually done by monitoring the diffusion coefficients and relaxation times, whose behavior is related to the translational and rotational random molecular motion of the system components. These parameters report on motion on very different time scales, thus providing structural information at a microscopic scale well beyond the usual image resolution. However, while relaxation-weighted images are relatively straightforward to record and analyze, the study of diffusion through MRI calls for an higher level of complexity from both a theoretical and instrumental point of view and it is nowadays well established in the form of diffusion tensor imaging (DTI), a technique introduced by Basser et al. in 1994 [1]. Although software modules exist that alleviate the tedious task of setting all the parameters for the DTI sequence in newer instruments or medical scanners, our old spectrometer - a 4.7 Tesla Bruker AM WB equipped with a PFG drive unit for microimaging - did not offer the "turnkey” DT-MRI Bruker acquisition interface. We got round this by implementing a DTI acquisition module and analyzing the raw data with an open source DTI reconstruction software [2]. Our experience led us to elaborate some of the theoretical and methodological basic concepts of DTI, summarized in the following steps: i) Theoretical basis and assumptions of the equations that lead to the true and apparent calculation of the diffusion coefficient(s) [3]; ii) Acquisition scheme: a diffusion-weighted preparation module based on stimulated echo (STEAM) to provide long diffusion times with minimal T2 relaxation [4] prior to and independent of the imaging scheme; iii) DTI scheme: the amount of diffusion weighting and at least six not collinear PFG orientations (icosahedral geometry) to estimate the six independent elements of the symmetric diffusion tensor; iv) the corrections for cross-terms interactions [5]; v) reduction of eddy currents that generate image artifacts; vi) diffusion tensor reconstruction from DTI raw data, providing information on sample microstructure and architecture for each voxel: mean diffusivity; anisotropy indices and fiber orientation mapping; vii) Phantoms to test and validate the whole procedure: isotropic (water, BSA) and anisotropic (fibers and celery) at different anisotropy degre

    Magnetic Resonance Imaging of molecular transport in living Morning Glory stems.

    Full text link
    MRI was applied to investigate the transport pathways in Morning Glory plant stems. The study was carried out on living plants without affecting their integrity. The architecture of a dicotyledonous plant was deeply characterized: the root system structure and the vascular bundle location were identified, the presence of central voids caused by cell maturation and loss were observed in the stem. Molecular transport components were recognized, by observing the concentration profile of a tracer, which changed with time after its absorption by the plant roots. MRI analysis revealed the presence of an axial transport as the progress of the tracer front through the vascular bundles and a radial molecular transport from the vascular bundles toward the surface of the stem. As a result, the tracer molecular transport formed the parabolic tracer front (PTF). A model was built up through the analysis of the PTF that consisted of an axial front at the peak position and a radial front at the width of the parabolic tail. PTF analysis revealed differences between the tracer transport velocities in the axial and the radial directions in the plant stem. The model revealed that the width of the parabolic tail reflected the magnitudes of diffusion and permeation of the tracer in the plant stem

    Solid state and microscopy NMR study of the chemical constituents of Afzelia Cuanzensis seeds

    No full text
    Multi-echo, chemical shift selective, and 3D NMR imaging at microscopy resolution, and CP MAS 13C NMR spectroscopy have been applied to the chemistry study of oil in oil-rich seeds of Afzelia cuanzensis, a tropical plant belonging to the Leguminosae taxum Caesalpinoideae or Caesalpinaceae

    1H and 13C NMR study of some polychlorobuta‐1,3‐diene derivatives

    No full text
    Because of the upsurge of interest in polychlorobuta-1,3-diene derivatives as uncommon contaminants in underground water, seven congeners, the three pentachloro- and four tetrachloro- [(Z)- and (E)-1,1,3,4- tetrachloro-, 1,1,4,4-tetrachloro- and (Z,Z)-1,2,3,4-tetrachloro]buta-1,3-dienes, were synthesized and their 1H and 13C NMR chemical shifts, nJ(1H,1H) and nJ(13C,1H) coupling constants were measured. The 13C NMR spectra were recorded in perdeuteroacetone with and without proton decoupling. In addition, to assign the 13C NMR spectrum of 1,1,2,4,4-pentachlorobuta-1,3-diene, a 2D-INADEQUATE 13C experiment was performed. The present results were compared with literature data on organochlorine compounds and possible conformations are discussed
    corecore