1,041 research outputs found
Ecological and evolutive implications of bacterial defences against predators
No full textBacterial communities are often heavily consumed by microfaunal predators, such as protozoa and nematodes. Predation is an important cause of mortality and determines the structure and activity of microbial communities in both terrestrial and aquatic ecosystems, and bacteria evolved various defence mechanisms helping them to resist predation. In this review, I summarize known antipredator defence strategies and their regulation, and explore their importance for bacterial fitness in various environmental conditions, and their implications for bacterial evolution and diversification under predation pressure. I discuss how defence mechanisms affect competition and cooperation within bacterial communities. Finally I present some implications of bacterial defence mechanisms for ecosystem services provided by microbial communities, such as nutrient cycling, virulence and the biological control of plant diseases
The model predator Acanthamoeba castellanii induces the production of 2,4, DAPG by the biocontrol strain Pseudomonas fluorescens Q2-87
No full textFluorescent pseudomonads show great potential as biological control agents due to their capability to produce antifungal toxins such as 2,4-diacetylphloroglucinol (DAPG). DAPG is synthesized from the precursor monoacetyl-phloroglucinol (MAPG) and its production depends on the metabolic state of the bacteria as well as on their interaction with other organisms. In this study we show that Pseudomonas fluorescens responds to the bacterivorous amoeba Acanthamoeba castellanii by upregulating the production of phloroglucinol derivates in a density-dependent manner. Living amoebae caused moreover a distortion of the MAPG to DAPG balance in favor of the latter, suggesting that amoebae may interfere with the first steps of DAPG synthesis. Predator-prey interactions appear thus to be an important factor for the regulation of antibiotics production in biocontrol microorganisms. (C) 2010 Elsevier Ltd. All rights reserved.Department of Plant Sciences, University of California, US
Plant diversity improves protection against soil-borne pathogens by fostering antagonistic bacterial communities
No full text1. Rhizosphere bacteria antagonistic to fungal pathogens improve plant performance by preventing infection. In temperate grasslands, primary productivity often increases with plant diversity, and we hypothesized that this effect may in part rely on the interactions between plants and antagonistic bacteria. 2. We investigated the impact of plant diversity and functional group composition on soil bacteria producing the antifungal compounds 2,4-diacetylphloroglucinol (DAPG) and pyrrolnitrin (PRN) in a long-term grassland biodiversity experiment, as well as their impact on soil suppressiveness. Soil suppressiveness was investigated in a model infection assay with Beta vulgaris and the pathogen Rhizoctonia solani. 3. The abundance of DAPG and PRN producers increased with plant diversity and that of PRN also increased in the presence of grasses. Moreover, legume species richness and coverage decreased the abundance of DAPG and PRN producers, respectively, contrary to beneficial effects of legumes on soil microorganisms reported previously. In turn, soil suppressiveness was at maximum when DAPG and PRN producer abundance was high. 4. Synthesis. Our results suggest that plant diversity contributes to plant community resistance against pathogens by fostering beneficial bacterial communities. This indirect soil feedback mechanism may contribute to the positive relationship between plant diversity and productivity and could also help the development of more sustainable and environmentally friendly agricultural management strategies.German Science Foundation [FOR 456
Secondary Metabolites of Pseudomonas fluorescens CHA0 Drive Complex Non-Trophic Interactions with Bacterivorous Nematodes
No full textNon-trophic interactions are increasingly recognised as a key parameter of predator-prey interactions. In soil, predation by bacterivorous nematodes is a major selective pressure shaping soil bacterial communities, and many bacteria have evolved defence mechanisms such as toxicity. In this study, we show that extracellular secondary metabolites produced by the model soil bacterium Pseudomonas fluorescens CHA0 function as a complex defence strategy against bacterivorous nematodes. Using a collection of functional mutants lacking genes for the biosynthesis of one or several extracellular metabolites, we evaluated the impact of bacterial secondary metabolites on the survival and chemotactic behaviour of the nematode Caenorhabditis elegans. Additionally, we followed up the stress status of the nematodes by measuring the activation of the abnormal DAuer Formation (DAF) stress cascade. All studied secondary metabolites contributed to the toxicity of the bacteria, with hydrogen cyanide efficiently repelling the nematodes, and both hydrogen cyanide and 2,4-DAPG functioning as nematicides. Moreover, these metabolites elicited the DAF stress response cascade of C. elegans, showing that they affect nematode physiology already at sublethal concentrations. The results suggest that bacterial secondary metabolites responsible for the suppression of plant pathogens strongly inhibit bacterivorous nematodes and thus likely contribute to the resistance of bacteria against predators in soil.German Federal Foundation for the Environment (DBU
Bacterial diversity stabilizes community productivity.
No full textBACKGROUND: Stability is a crucial ecosystem feature gaining particular importance in face of increasing anthropogenic stressors. Biodiversity is considered to be a driving biotic force maintaining stability, and in this study we investigate how different indices of biodiversity affect the stability of communities in varied abiotic (composition of available resources) and biotic (invasion) contexts. METHODOLOGY/PRINCIPAL FINDINGS: We set up microbial microcosms to study the effects of genotypic diversity on the reliability of community productivity, defined as the inverse of the coefficient of variation of across-treatment productivity, in different environmental contexts. We established a bacterial diversity gradient ranging from 1 to 8 Pseudomonas fluorescens genotypes and grew the communities in different resource environments or in the presence of model invasive species. Biodiversity significantly stabilized community productivity across treatments in both experiments. Path analyses revealed that different aspects of diversity determined stability: genotypic richness stabilized community productivity across resource environments, whereas functional diversity determined stability when subjected to invasion. CONCLUSIONS/SIGNIFICANCE: Biodiversity increases the stability of microbial communities against both biotic and abiotic environmental perturbations. Depending on stressor type, varying aspects of biodiversity contribute to the stability of ecosystem functions. The results suggest that both genetic and functional diversity need to be preserved to ensure buffering of communities against abiotic and biotic stresses
Evolutionary history predicts the stability of cooperation in microbial communities
No full textCooperation fundamentally contributes to the success of life on earth, but its persistence in diverse communities remains a riddle, as selfish phenotypes rapidly evolve and may spread until disrupting cooperation. Here we investigate how evolutionary history affects the emergence and spread of defectors in multispecies communities. We set up bacterial communities of varying diversity and phylogenetic relatedness and measure investment into cooperation (proteolytic activity) and their vulnerability to invasion by defectors. We show that evolutionary relationships predict the stability of cooperation: phylogenetically diverse communities are rapidly invaded by spontaneous signal-blind mutants (ignoring signals regulating cooperation), while cooperation is stable in closely related ones. Maintenance of cooperation is controlled by antagonism against defectors: cooperators inhibit phylogenetically related defectors, but not distant ones. This kin-dependent inhibition links phylogenetic diversity and evolutionary dynamics and thus provides a robust mechanistic predictor for the persistence of cooperation in natural communities
Increasing antagonistic interactions cause bacterial communities to collapse at high diversity
No full textBiodiversity is a major determinant of ecosystem functioning. Species-rich communities often use resources more efficiently thereby improving community performance. However, high competition within diverse communities may also reduce community functioning. We manipulated the genotypic diversity of Pseudomonas fluorescens communities, a plant mutualistic species inhibiting pathogens. We measured antagonistic interactions in vitro, and related these interactions to bacterial community productivity (root colonisation) and ecosystem service (host plant protection). Antagonistic interactions increased disproportionally with species richness. Mutual poisoning between competitors lead to a negative complementarity effect, causing a decrease in bacterial density by up to 98% in diverse communities and a complete loss of plant protection. The results emphasize that antagonistic interactions may determine community functioning and cause negative biodiversityecosystem functioning relationships. Interference competition may thus be an additional key for predicting the dynamics and performance of natural assemblages and needs to be implemented in future biodiversity models
Niche dimensionality links biodiversity and invasibility of microbial communities
No full textBiodiversity is a central factor driving community invasibility. Diverse communities exploit resources more efficiently, leaving less free niche space available to invaders. Niche partitioning, however, is only possible in complex resource environments, and we hypothesized that resource richness drives the biodiversityinvasibility relationship. We tested the effect of two biodiversity indices, taxonomic richness and functional dissimilarity, on the invasibility of Pseudomonas fluorescens communities in microcosms of varying resource richness, herein used as a proxy for niche dimensionality, because different P.fluorescens genotypes differed in their ability to use those resources. Invader success was negatively correlated with the diversity of the resident community, with functional dissimilarity being of greater significance than taxonomic richness. Varied niche dimensionality revealed different mechanisms determining community invasibility: at low niche dimensionality, invasibility was driven by the presence of particular genotypes (identity effect) rather than by the biodiversity of the resident community. At high niche dimensionality, functional dissimilarity increased community productivity and reduced invasion, most likely through complementarity effects. The results show that functionally dissimilar bacterial strains efficiently exploit their environment, reducing the resources available for invasive species. These findings call for the preservation of functionally dissimilar taxa to warrant resistance of communities against invasive species, in particular, in environments of high niche dimensionality.Deutsche Forschungsgemeinschaft (DFG) [Ei 862/1, Ei 862/2
Intraspecific genotypic richness and relatedness predict the invasibility of microbial communities
No full textBiological invasions can lead to extinction events in resident communities and compromise ecosystem functioning. We tested the effect of two widespread biodiversity measurements, genotypic richness and genotypic dissimilarity on community invasibility. We manipulated the genetic structure of bacterial communities (Pseudomonas fluorescens) and submitted them to invasion by Serratia liquefaciens. We show that the two diversity measures impact on invasibility via distinct and additive mechanisms. Genotypic dissimilarity of the resident communities linearly increased productivity and in parallel decreased invasion success, indicating that high dissimilarity prevents invasion through niche pre- emption. By contrast, genotypic richness exerted a hump-shaped effect on invasion and was linked to the production of toxins antagonistic to the invader. This effect peaked at intermediate richness, suggesting that high richness levels may increase invasibility. Invasibility could be well predicted by the combination of these two mechanisms, documenting that both genotypic richness and dissimilarity need to be considered, if we are to understand the biotic properties determining the susceptibility of ecosystems to biological invasions. The ISME Journal (2011) 5, 1108-1114; doi:10.1038/ismej.2011.9; published online 24 February 2011 Subject Category: microbial population and community ecolog
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