1,721,062 research outputs found
Brucella WT
No full textBrucella abortus WT<strong>Tilt Series Date:</strong> 2014-03-17</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Brucella abortus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong> Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Ų, defocus: -10.0 μm, magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Sean Crosson</p>Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-03-17-42</p>BrucellaWT0010.mrc, Tilt Series (Pixel Size 0.32 nm), 3.4 GB
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BrucellaWT0010_part121_8.rec, Reconstruction (Pixel Size 1.28 nm), 712.7 MB
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Brucella WT
No full textBrucella abortus WT<strong>Tilt Series Date:</strong> 2014-03-17</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Brucella abortus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong> Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Ų, defocus: -10.0 μm, magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Sean Crosson</p>Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-03-17-52</p>BrucellaWT0020.mrc, Tilt Series (Pixel Size 0.32 nm), 3.4 GB
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BrucellaWT0020_part121_2.rec, Reconstruction (Pixel Size 1.28 nm), 712.7 MB
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Brucella WT
No full textBrucella abortus WT<strong>Tilt Series Date:</strong> 2014-03-17</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Brucella abortus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong> Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Ų, defocus: -10.0 μm, magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Sean Crosson</p>Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-03-17-53</p>BrucellaWT0021.mrc, Tilt Series (Pixel Size 0.32 nm), 3.4 GB
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BrucellaWT0021_part121_5.rec, Reconstruction (Pixel Size 1.28 nm), 712.7 MB
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aba2014-03-17-53_slicer19279.png, It's not clear to me at all whether there is a REZ here. There does appear to be a general reduction of overal visible density (lighter grey level) in the cell interior, but ribosomes are not clearly visible, so we should probably ignore this. -andrew, 822.3 kB
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Brucella abortus
No full textBrucella melitensis wild type, 2YT medium fixed according to BSL3 protocol<strong>Tilt Series Date:</strong> 2014-02-18</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Brucella abortus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong> Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Ų, defocus: -10.0 μm, magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Sean Crosson</p>
aba2014-02-18-20_slicer9194.jpg: nested periplasmic vesicle, Brucella abortusFiles available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-18-20</p>brucella2YTMedium0021.mrc, Tilt Series (Pixel Size 0.39 nm), 3.4 GB
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brucella2YTMedium0021_full.rec, Reconstruction (Pixel Size 1.56 nm), 445.4 MB
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Brucella WT
No full textBrucella abortus WT<strong>Tilt Series Date:</strong> 2014-03-17</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Brucella abortus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong> Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Ų, defocus: -10.0 μm, magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Sean Crosson</p>Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-03-17-37</p>BrucellaWT0005.mrc, Tilt Series (Pixel Size 0.32 nm), 3.4 GB
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BrucellaWT0005_part121_8.rec, Reconstruction (Pixel Size 1.28 nm), 712.7 MB
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Brucella abortus
No full textBrucella melitensis wild type, 2YT medium fixed according to BSL3 protocol<strong>Tilt Series Date:</strong> 2014-02-18</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Brucella abortus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong> Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Ų, defocus: -10.0 μm, magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Sean Crosson</p>Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-18-26</p>brucella2YTMedium0027.mrc, Tilt Series (Pixel Size 0.39 nm), 3.4 GB
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brucella2YTMedium0027_part121_2.rec, Reconstruction (Pixel Size 1.56 nm), 445.4 MB
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Brucella abortus
No full textBrucella melitensis wild type, 2YT medium fixed according to BSL3 protocol<strong>Tilt Series Date:</strong> 2014-02-18</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Brucella abortus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong> Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Ų, defocus: -10.0 μm, magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Sean Crosson</p>Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-18-9</p>brucella2YTMedium0010.mrc, Tilt Series (Pixel Size 0.39 nm), 3.4 GB
<a role="button" class="ui compact mini button" href="https://renc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-18-9/rawdata/brucella2YTMedium0010.mrc"
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brucella2YTMedium0010_part121_3.rec, Reconstruction (Pixel Size 1.56 nm), 445.4 MB
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Brucella WT
No full textBrucella abortus WT<strong>Tilt Series Date:</strong> 2014-04-10</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Brucella abortus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong> Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Ų, defocus: -10.0 μm, magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Sean Crosson</p>Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-04-10-2</p>BrucellaWT0024.mrc, Tilt Series (Pixel Size 0.32 nm), 3.4 GB
<a role="button" class="ui compact mini button" href="https://renc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-04-10-2/rawdata/BrucellaWT0024.mrc"
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BrucellaWT0024_part121_7.rec, Reconstruction (Pixel Size 1.28 nm), 712.7 MB
<a role="button" class="ui compact mini button" href="https://renc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-04-10-2/3dimage_41231/BrucellaWT0024_part121_7.rec"
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Brucella WT
No full textBrucella abortus WT<strong>Tilt Series Date:</strong> 2014-03-17</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Brucella abortus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong> Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Ų, defocus: -10.0 μm, magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Sean Crosson</p>Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-03-17-54</p>BrucellaWT0022.mrc, Tilt Series (Pixel Size 0.32 nm), 3.4 GB
<a role="button" class="ui compact mini button" href="https://renc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-03-17-54/rawdata/BrucellaWT0022.mrc"
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Brucella WT
No full textBrucella abortus WT<strong>Tilt Series Date:</strong> 2014-03-17</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Brucella abortus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong> Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Ų, defocus: -10.0 μm, magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Sean Crosson</p>Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-03-17-38</p>BrucellaWT0006.mrc, Tilt Series (Pixel Size 0.32 nm), 3.4 GB
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BrucellaWT0006_part121_9.rec, Reconstruction (Pixel Size 1.28 nm), 712.7 MB
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