1,721,051 research outputs found
CHC and Odorant Gene Analysis
No full textAnalysis of differential expression of putative odorant receptor and CHC biosynthesis genes. Included is R code for analysis, count table input, sample information, list of putative genes to test, and transcriptome annotation, Information on samples and processing up to the counts file can be found here: https://doi.org/10.1101/2021.06.03.44691
Differential expression analysis
No full textScripts and input files for performing the differential expression analyse
Allele Specific Expression Analysis
No full textScripts, input files, and raw read count data for the allele specific expression analysis
Differential expression analysis
No full textScripts and input files for performing the differential expression analyse
Univariate analysis of EAD active compounds
No full textR code to do univariate analyses of the GC-EAD compounds perceived by females. Included is the R code and input data. Input data are peak areas normalized on the internal standard peak area and fly weight
Structural Variants and Speciation: Multiple Processes at Play
No full textResearch on the genomic architecture of speciation has increasingly revealed the importance of structural variants (SVs) that affect the presence, abundance, position, and/or direction of a nucleotide sequence. SVs include large chromosomal rearrangements such as fusion/fissions, inversions and translocations, as well as smaller variants such as duplications, insertions, and deletions (CNVs). Although we have ample evidence that SVs play a key role in speciation, the underlying mechanisms differ depending on the type and length of the SV, as well as the ecological, demographic and historical context. We review predictions and empirical evidence for classic processes such as underdominance due to meiotic aberrations and the coupling effect of recombination suppression before exploring how recent sequencing methodologies illuminate the prevalence and diversity of SVs. We discuss specific properties of SVs and their impact throughout the genome, highlighting that multiple processes are at play, and possibly interacting, in the relationship between SVs and speciation.Fil: Berdan, Emma L.. University Goteborg; SueciaFil: Aubier, Thomas G.. Université Paul Sabatier Toulouse III; ArgentinaFil: Cozzolino, Salvatore. University Of Naples Federico II; ItaliaFil: Faria, Rui. Universidade Do Porto; PortugalFil: Feder, Jeffrey L.. University of Notre Dame; Estados UnidosFil: Giménez, Mabel Dionisia. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Gobierno de la Provincia de Misiones. Ministerio de Salud de la Provincia de Misiones. Instituto de Genética Humana;Fil: Joron, Mathieu. Universite de Montpellier; FranciaFil: Searle, Jeremy Byron. Cornell University; Estados UnidosFil: Mérot, Claire. Universite de Rennes I; Franci
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