37 research outputs found
VariantEffect/mavedb-api: v2023.2.0
No full textRelease notes
Mapped variants. A data model has been added that holds VRS representations of variants, and API endpoints have been added to return these for one variant or for all variants in a score set
VariantEffect/mavedb-ui: v2023.4.0
No full text<p>Release notes</p>
<p>This release works with mavedb-api version 2023.4.0.</p>
<ul>
<li>Support for score sets with genomic reference coordinates</li>
<li>A heatmap of single-AA variants in a scoreset</li>
</ul>
VariantEffect/mavedb-api: v2023.2.1
No full textRelease notes
New, more extensive router unit tests
Child URN lists. Experiment responses now include a list of score set URNS, and meta-analysis score sets include meta-analyzed score set URNs.
Fixed a bug in detecting meta-analyses during score set creation.
Various score set fixes
More uniform permission handling
Revised logic for assigning meta-analyses to experiments
Other minor change
VariantEffect/mavedb-api: v2023.1.2
No full textRelease notes
Fixed: License text was included in API responses.
New API endpoint for version information.
Cleaned up unneeded log messages.
Implemented Slack error notification.
Enhanced score set access control.
New mapped variant data model
New publication data model, with primary and secondary publications
API endpoint path elements now use kebab case consistently.
'Score set' is treated as two words consistently.
Bumped the MaveHGVS package version to 0.6.0
VariantEffect/mavedb-api: v2023.4.2
No full text<h2>What's Changed</h2>
<ul>
<li>Update README.md to add reference to MaveDB paper by @ashsny in https://github.com/VariantEffect/mavedb-api/pull/103</li>
<li>Release 2023.4.2. by @ashsny in https://github.com/VariantEffect/mavedb-api/pull/115</li>
</ul>
<p><strong>Full Changelog</strong>: https://github.com/VariantEffect/mavedb-api/compare/v2023.4.1...v2023.4.2</p>
VariantEffect/mavedb-ui: v2023.1.2
No full textInitial release, with changes corresponding to MaveDB API version 2023.1.2
VariantEffect/mavedb-ui: v2023.3.0
No full text<p><strong>Release notes</strong></p>
<p>This release works with mavedb-api version 2023.3.0.</p>
<ul>
<li>Support for preprints</li>
<li>Ability to search experiments and score sets by publication identifier</li>
</ul>
VariantEffect/mavedb-ui: v2023.1.3
No full textRelease notes
Meta-analysis score sets are now created without choosing a parent experiment. See the API documentation for more details. Further UI work should be done to improve the experience of creating a meta-analysis.
Minor bug fixe
VariantEffect/mavedb-api: v2023.1.3
No full textRelease notes
Meta-analysis score sets must now be created outside a user-created experiment. If there are existing meta-analyses for the same collection of underlying score sets, the new meta-analysis is added to their experiment; otherwise, a new experiment is created
VariantEffect/mavedb-api: v2023.4.0
No full text<p><strong>Release notes</strong></p>
<ul>
<li>Support for score sets with genomic reference coordinates</li>
<li>Bug fix for searching by target organism</li>
</ul>
