46 research outputs found

    Biomechanical Properties of the Ocular Globe Based on Ex Vivo Testing and Multiscale Numerical Modelling

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    The present study is the culmination of quantifying and qualitative experimental and numerical research representing biomechanical behaviour of the human eye. A new experimental technique for testing intact eye globes in a form that is representative of in vivo conditions is developed which is suitable for determining the material properties of the complete outer ocular tunic. A test rig has been developed to provide closed-loop control of either applied intraocular pressure or resulting apical displacement, measurement of displacements across the external surface of eye globe using high-resolution digital cameras and digital image correlation software, prevention of rigid-body motion and protection of ocular surface from environmental drying. The method has been demonstrated on one human and i one porcine eye globe, which were cyclically loaded. Finite element models based on specimen specific tomography, free from rotational symmetry, were used along with experimental pressure-displacement data in an inverse analysis process to derive the mechanical properties of tissue in different regions of the eye’s outer tunic. The test method enabled monitoring of mechanical response to intraocular pressure variation across the surface of the eye globe. For the two eyes tested, the method showed a gradual change in the sclera’s stiffness from a maximum at the limbus to a minimum at the posterior pole, while in the cornea the stiffness was highest at the centre and lowest in the peripheral zone. Further, for both the sclera and cornea, the load-displacement behaviour did not vary significantly between loading cycles. The first methodology capable of mechanically testing intact eye globes, with applied loads and boundary conditions that closely represent in vivo conditions has been introduced. The method enables determination of the regional variation in mechanical behaviour across the ocular surface. Two numerical models based in continuum mechanics theory have been developed which represent the 3D anisotropic behaviour of the corneal stroma. Experimental data has been gathered from a number of previous studies to provide the basis and calibration parameters for the numerical modelling. The resulting models introduce numerical representation of collagen fibril density and its related regional variation, interlamellar cohesion and age-related stiffening in anisotropic and viscoelastic models of the human cornea. Further, the models incorporate previous modelling developments including representation of lamellae anisotropy and stiffness of the underlying matrix. Wide angle X-ray scattering has provided measured data which quantifies relative fibril anisotropy in the 2D domain. Accurate numerical description of material response to deformation is essential to providing representative simulations of corneal behaviour. Representing experimentally obtained 2D anisotropy and regional density variation in the 3D domain is an essential component of this accuracy. The constitutive model was incorporated into finite element analyses. Combining with inverse analysis, the model was calibrated to an extensive experimental database of ex vivo corneal inflation tests and ex vivo corneal shear tests. This model represented stiffness of the underlying matrix which is 2−3 orders of magnitude lower than the mechanical response representing the collagen fibrils in the lamellae. The presented model, along with its age dependent material coefficients, allows finite element modelling for an individual patient with material stiffness approximated based on their age. This has great potential to be used in both daily clinical practice for the planning and optimisation of corrective procedures and in pre-clinical optimisation of diagnostic procedures. The second constitutive numerical model based on the continuum mechanics theory was developed which extended the representation of the model above to include both age-related viscoelastic stiffening behaviour of the human cornea. Experimental data gathered from a number of previous studies on 48 ex vivo human cornea (inflation and shear tests) enabled numerical model calibration. The present study suggests that stiffness parallel to the lamellae of the cornea approximately doubles from an increase in strain-rate of 0.5 − 5%/min. While the underlying stromal matrix provides a stiffness 2−3 orders of magnitude lower than the lamellae. The model has been simultaneously calibrated to within 5% error across three age groups ranging from 50 − 95, multiple strain-rates and multiple loading scenarios. Age and strain-rate dependent material coefficients allow finite element modelling for an individual patient with material stiffness approximated by their age under varying loading scenarios. This present study addresses a significant gap in numerical representation of the cornea and has great potential in both daily clinical practice particularly in highly viscoelastic dependent simulations such as non-contact tomometry. Related to this thesis, the author has either primarily or secondarily authored the following related journal articles which are included in this thesis in modified forms: Whitford C. & Elsheikh A., Corneal Biomechanics Testing Methods, May 2014, Chinese Journal of Optometry and Ophthalmology Visual Science; Whitford C., Joda A., Jones S., Bao F., Rama P. & Elsheikh A., Ex-vivo Test- ing of Intact Eye Globes Under Inflation Conditions to Determine Regional Variation of Mechanical Stiffness, July 2016, Eye and Vision. Elsheikh, A., Whitford, C., Hamarashid, R., Kassem, W., Joda, A., B¨uchler, P., Stress free configuration of the human eye. Febuary 2013, Medical Engineering & Physics. Yu J., Bao F., Feng Y., Whitford C., Ye T., Huang Y., Wang Q., Elsheikh A., Assessment of Corneal Biomechanical Behavior Under Posterior and Ante- rior Pressure. January 2013, Journal of Refractive Surgery. Whitford C., Studer H., Boote K., Meek K.M. & Elsheikh A., Biomechanical Model of the Human Cornea: Considering Shear Stiffness and Regional Variation of Collagen Anisotropy and Density, Feb 2015, Journal of the Mechanical Behavior of Biomedical Materials. Elsheikh A., McMonnies C.W., Whitford C. & Boneham G.C., In-vivo study of Corneal Responses to Increased Intraocular Pressure, 2015, Eye and Vision. An additional journal publication has been prepared from the content in this present study: Whitford C., Movchan N. & Elsheikh A., A Viscoelastic Hyperelastic Anisotropic Model of the Human Cornea. Further, two book chapters have been published which related to this thesis: Whitford C., Studer H., Boote C., Meek K. & Elsheikh A., Modelo Biomecnico de la Crnea Humana Considerando la Variacin Regional de la Anisotropa, la Densidad y la Cohesin Interlaminar de las Fibrillas de Colgeno, in Biomec- nica y Arquitectura Corneal, May 2014. Geraghty B., Whitford C., Boote C., Akhtar R,. & Elsheikh A., Age-Related Variation in the Biomechanical and Structural Properties of the Corneo- Scleral Tunic, in Mechanical Properties of Ageing Soft Tissues, January 2015. In addition, a number of conference proceedings have been published

    Discovery and characterization of a novel KATP channel pharmacochaperone

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    My work resulted in the discovery of a novel KATP channel pharmacochaperone, Aekatperone, through AI-driven virtual screening of the drug binding site using the Cryo-EM structure of the KATP channel. Additionally, I functionally characterized the effects of Aekatperone on novel trafficking mutations associated with congenital hyperinsulinism

    Projection-based Embedded Discrete Fracture Model (pEDFM) on Corner-point Grid Geometry for Subsurface Flow and Geothermal Modeling

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    We develop projection-based embedded discrete fracture model (pEDFM) on corner-point grids (CPG) for fluid flow and heat transfer in subsurface geological formations. The coupling between the flow and heat transfer is fully-implicit, to allow for stable simulations, specially in presence of highly contrasting fractures. We define independent CPG-based mesh for matrix rock and all 3D fractures, which allows for capturing geologically complex geometries. The connectivities between the non-neighbouring cells are described such that a consistent discrete representation of the embedded fractures are developed within the CPG geometry. Numerical rests are developed first to verify the CPG grid implementation compared with the Cartesian structured ones, and then to illustrate the applicability of the pEDFM for field-scale geologically complex reservoirs.Green Open Access added to TU Delft Institutional Repository ‘You share, we take care!’ – Taverne project https://www.openaccess.nl/en/you-share-we-take-care Otherwise as indicated in the copyright section: the publisher is the copyright holder of this work and the author uses the Dutch legislation to make this work public.Numerical AnalysisReservoir Engineerin

    Technical And Managerial Development For Raising Efficiency In

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    The present thesis is a research in the power generation field, specially in Dr. Sharif Power Station. The author in the present research has got use of his long experience in this field in the Sudan as well as abroad, where ultimately he dared to cope with modern sophisticated technologies in power generation. The author targeted from this thesis to reduce the generated power cost, and in the same time, to raise the efficiency of the generating units to higher levels – through practicing modern sophisticated technology that he aimed to introduce and transfer to the Sudan. As a product of a large number of processes, the electrical power generation represents about 30% of the initial energy of the primary fuel used. This is a very low figure, and partly explains the high cost of electricity compared with other sources of energy The electrical power generation is a result of processes of energy conversion. The chemical energy of fuels is converted to heat energy in the furnace or combustion chamber, which in its turn is converted to mechanical energy in the prime mover (e.g. gas turbine, steam turbine or diesel engine) which rotates the rotor of the generator, where it is converted to electrical power. During this process a large number of energy is dissipated as heat in the cooling water and in the exhaust gases, as we will see later. In the early 1970s an oil crisis took place due to the Middle East war of 1973. The prices of oil shot up from US3perbarrelofoiltoUS 3 per barrel of oil to US 30 per barrel. Due to high cost of fuel, which represents at present 70% of the total electrical power generation cost, the energy conversion in power generation process has become more essential for efficient operations. The modern technology in power generation has led to efficiency improvement, and hence has led to running cost saving, e.g. using energy recovery methods leads to financial gain by reducing the cost of electricity production, and mainly by reducing fuel consumption. Through history the thermal efficiency has increased from 5% for the old steam engine to 30% for the gas turbine and to 33% for the steam turbine and finally to 52.5% for the combined cycle. The gas turbine and steam turbine efficiencies can be more raised by utilizing sophisticated technologies, e.g. air inlet chillers for gas turbines, and steam reheating for steam turbines, as we see later. The electrical energy consumed by a nation is directly proportional to its standard of living or its Gross National Product. For example, the under-developed countries use about 0.5 kW per person, compared with a rate in the developed world of between 5 and 10 kW per person (ref. 5). The subject matter of the authors M.Sc also dealt with Dr. Sharif Power Station, but from different aspects other than what will appear in the present Ph.D thesis. It is beneficial to show briefly herewith, the aspects of the M.Sc thesis in order to create a general concept to the reader about Dr. Sharif power station progress

    Wireless decode-and-forward relay channels: time allocation strategies for cooperation and optimum operation

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    Relay channels have been in use for decades as an effective means to tackle some of the challenges facing wireless transmission. Recent studies considered re-employing the relay channel to serve modern wireless systems. Material offered in this book was originally presented by the author as a thesis for the degree of Ph.D. to University College London. In this book two-hop and multi-hop D&F relay channels with half-duplex constraint on relays are studied. Channel's mutual information and outage probability are investigated for AWGN and Rayleigh fading channels. Optimum routing and optimum time allocation policies are also considered. In addition, a scheme is presented for user cooperation. Material offered in this book is useful to further investigate the visibility of relaying in wireless transmission and to develop user cooperative schemes. This book can be of use to communication and information theoretic researchers investigating relay channels, routing in wireless networks, cross-layer design, ad hoc networks, user cooperative communications and cognitive systems

    Diya of the Miseria Tribe after the Abolition of Native Administration

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    This paper had been presented for promotion at the University of Khartoum. To get the full text please contact the other at [email protected]• Diya (blood money) is normally paid in murder cases to the family of the victim and Miseria calls it ‘mihaya al-dam’ which means in Arabic (the blood eraser). It is paid in all cases irrespective whether the accused is convicted or acquitted. If accepted no revenge shall take place and it hence acts as a deterrence mechanism for further violence. Before diya is agreed upon and paid tribal conciliation ‘sulh’ is required between the family of the accused and the family of the victims. The author argues that conciliation is normally accomplished through Agaweed (credible conciliators) normally agreed upon by both parties to the conflict. • Miseria have two types of diya: (a) diya of ‘Saf’ and; (b)diya of ‘Badna’. However, the mount of diya varies and depends on the gravity of the crime. For example, murder in the context of tribal fight or intentional murder requires payment of 60 cows if the victim is a male and 30 cows if the victim is a female. In cases of manslaughter or unintentional murder diya is 30 cows for a male victim and 15 cows for a female victim. Other types of compensation fall short of diya are applied in cases of grievous bodily harm (GBH), deliberate limb amputation or loss of body parts (i.e. eye, nose, ear, teeth etc..) 30 cows is payable if the aggrieved person is a male and 15 cows if a female. • When diya is paid to members of the family of the victim, they are prohibited to take any sort of revenge otherwise social sanctions will be imposed on them and the family will regarded as socially outcast and no longer belongs to the tribe. The author argues that the system of diya as practiced by the Meseria tribe has assumed a vital role in resolving social and communal disputes particularly in the absence of the Police in the tribal areas to maintain law and order. • The author then highlights obstacles facing the implementation of the diya system after its abolition. He argues that in the past Nazir of the tribe, aided by Omda, is a key figure in the administration and distribution of the diya system and his role as a presiding Judge of Native Court as regulated by the Administration of Courts Act. This Act empowers or entrusts native courts to apply customary law when adjudicating cases. However, after the abolition of native administration, the role of the tribal justice was weakened and undermined. The author then has raised serious questions such as whether government local councils will be able to replace it, particularly the Local Popular Government Act entrusted the executive councils to engage in arbitration and tribal conciliation ( section 5 (10)

    Promising and worth-to-try future directions for advancing state-of-the-art surrogates methods of agent-based models in social and health computational sciences

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    The execution and runtime performance of model-based analysis tools for realistic large-scale ABMs (Agent-Based Models) can be excessively long. This due to the computational demand exponentially proportional to the model size (e.g. Population size) and the number of model parameters. Even the runtime of a single simulation of a realistic ABM may demand huge computational resources when attempting to employ realistic population size. The main aim of this ad-hoc brief report is to highlight some of surrogate models that were adequate and computationally less demanding for nonlinear dynamical models in various modeling application areas.To the author knowledge, these methods have been not, at least extensively, employed for ABMs within the field of (SHCS) Social Health Computational Sciences, yet. Thus, they might be, but not necessarily, useful in progressing state of the art for establishing surrogate models for ABMs in the field of SHCS.Comment: 4 page

    Dynamic duo: Kir6 and SUR in KATP channel structure and function

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    KATP channels are ligand-gated potassium channels that couple cellular energetics with membrane potential to regulate cell activity. Each channel is an eight subunit complex comprising four central pore-forming Kir6 inward rectifier potassium channel subunits surrounded by four regulatory subunits known as the sulfonylurea receptor, SUR, which confer homeostatic metabolic control of KATP gating. SUR is an ATP binding cassette (ABC) protein family homolog that lacks membrane transport activity but is essential for KATP expression and function. For more than four decades, understanding the structure-function relationship of Kir6 and SUR has remained a central objective of clinical significance. Here, we review progress in correlating the wealth of functional data in the literature with recent KATP cryoEM structures

    Development of duststorm attenuation model for microwave links

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    Duststorms are significant meteorological phenomenon occur for a significant percentage of time in arid and semi arid areas especially at African Sahara and Middle East. Measurements at existing microwave links show that the duststorms can potentially result in serious attenuation in signal level especially at Ku band and higher frequencies with direct impact on telecommunications system performance. Very limited research has been done to predict the attenuation even the scarcity of measured data forces the researcher to work for the duststorm prediction modeling
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