IBS Publications Repository
Not a member yet
10173 research outputs found
Sort by
Single-atom catalysts supported on a hybrid structure of boron nitride/graphene for efficient nitrogen fixation via synergistic interfacial interactions
Hexagonal boron nitride (BN) shows significant chemical stability and promising thermal nitrogen reduction reaction (NRR) activity but suffers from low conductivity in electrolysis with a wide band gap. To overcome this problem, two-dimensional (2D) BN and graphene (G) are designed as a heterostructure, namely BN/G. According to density functional theory (DFT), the higher conductivity of G narrows the band gap of BN by inducing some electronic states near the Fermi energy level (Ef). Once transition metals (TMs) are anchored in the BN/G structure as single atom catalysts (SACs), the NRR activity improves as the inert BN basal layer activates with moderate *NH2 binding energy and further the band gap is reduced to zero. V (vanadium) and W (tungsten) SACs exhibit the best performance with limiting potentials of −0.22 and −0.41 V, respectively. This study helps in understanding the improvement of the NRR activity of BN, providing physical insights into the adsorbate-TM interaction. © 2024 The Royal Society of Chemistry.11Nsciescopu
Long-term inhibition of ODC1 in APP/PS1 mice rescues amyloid pathology and switches astrocytes from a reactive to active state
Alzheimer’s disease (AD) is characterized by the loss of memory due to aggregation of misphosphorylated tau and amyloid beta (Aβ) plaques in the brain, elevated release of inhibitory neurotransmitter gamma-aminobutyric acid (GABA) and reactive oxygen species from astrocytes, and subsequent neurodegeneration. Recently, it was found that enzyme Ornithine Decarboxylase 1 (ODC1) acts as a bridge between the astrocytic urea cycle and the putrescine-to-GABA conversion pathway in the brain of AD mouse models as well as human patients. In this study, we show that the long-term knockdown of astrocytic Odc1 in APP/PS1 animals was sufficient to completely clear Aβ plaques in the hippocampus while simultaneously switching the astrocytes from a detrimental reactive state to a regenerative active state, characterized by proBDNF expression. Our experiments also reveal an effect of astrocytic ODC1 inhibition on the expression of genes involved in synapse pruning and organization, histone modification, apoptotic signaling and protein processing. These genes are previously known to be associated with astrocytic activation and together create a neuroregeneration-supportive environment in the brain. By inhibiting ODC1 for a long period of 3 months in AD mice, we demonstrate that the beneficial amyloid-clearing process of astrocytes can be completely segregated from the systemically harmful astrocytic response to insult. Our study reports an almost complete clearance of Aβ plaques by controlling an endogenous degradation process, which also modifies the astrocytic state to create a regeneration-supportive environment in the brain. These findings present the potential of modulating astrocytic clearance of Aβ as a powerful therapeutic strategy against AD. © 2024, The Author(s).11Ysciescopu
Full automation of point defect detection in transition metal dichalcogenides through a dual mode deep learning algorithm
Point defects often appear in two-dimensional (2D) materials and are mostly correlated with physical phenomena. The direct visualisation of point defects, followed by statistical inspection, is the most promising way to harness structure-modulated 2D materials. Here, we introduce a deep learning-based platform to identify the point defects in 2H-MoTe2: synergy of unit cell detection and defect classification. These processes demonstrate that segmenting the detected hexagonal cell into two unit cells elaborately cropped the unit cells: further separating a unit cell input into the Te2/Mo column part remarkably increased the defect classification accuracies. The concentrations of identified point defects were 7.16 x 1020 cm2 of Te monovacancies, 4.38 x 1019 cm2 of Te divacancies and 1.46 x 1019 cm2 of Mo monovacancies generated during an exfoliation process for TEM sample-preparation. These revealed defects correspond to the n-type character mainly originating from Te monovacancies, statistically. Our deep learning-oriented platform combined with atomic structural imaging provides the most intuitive and precise way to analyse point defects and, consequently, insight into the defect-property correlation based on deep learning in 2D materials. We advocate for the development of expertise in visualizing and identifying point defects in two-dimensional (2D) materials, a skillset intimately linked to a wide array of physical phenomena.11Nsciescopu
Scalable Feature Extraction and Tracking (SCAFET): A general framework for feature extraction from large climate data sets
This study describes a generalized computational mathematical framework, Scalable Feature Extraction and Tracking (SCAFET), that extracts and tracks features from large climate data sets. SCAFET utilizes novel shape-based metrics that can identify and compare features from different mean states, data sets, and between distinct regions. Features of interest such as atmospheric rivers, tropical and extratropical cyclones, and jet streams are extracted by segmenting the data based on a scale-independent bounded variable called the shape index (SI). The SI gives a quantitative measurement of the local geometric shape of the field with respect to its surroundings. Compared to other widely used frameworks in feature detection, SCAFET does not use a posteriori assumptions about the climate model or mean state to extract features of interest and levelize the comparison between different models and scenarios. To demonstrate the capabilities of the method, we illustrate the detection of atmospheric rivers, tropical and extratropical cyclones, sea surface temperature fronts, and jet streams. Cyclones and atmospheric rivers are extracted to show how the algorithm identifies and tracks both the nodes and areas from climate data sets. The extraction of sea surface temperature fronts exemplifies how SCAFET effectively handles curvilinear grids. Last, jet streams are extracted to demonstrate how the algorithm can also detect three-dimensional features. As a generalized framework, SCAFET can be implemented to extract and track many weather and climate features across scales, grids, and dimensions. © 2024 Arjun Babu Nellikkattil et al.11Ysciescopu
Recognizing the G 2-horospherical Manifold of Picard Number 1 by Varieties of Minimal Rational Tangents
Pasquier and Perrin discovered that the G2-horospherical manifold X of Picard number 1 can be realized as a smooth specialization of the rational homogeneous space parameterizing the lines on the 5-dimensional hyperquadric; in other words, it can be deformed nontrivially to the rational homogeneous space. We show that X is the only smooth projective variety with this property. This is obtained as a consequence of our main result that X can be recognized by its VMRT, namely, a Fano manifold of Picard number 1 is biregular to X if and only if its VMRT at a general point is projectively isomorphic to that of X. We employ the method the authors developed to solve the corresponding problem for symplectic Grassmannians, which constructs a flat Cartan connection in a neighborhood of a general minimal rational curve. In adapting this method to X, we need an intricate study of the positivity/negativity of vector bundles with respect to a family of rational curves, which is subtler than the case of symplectic Grassmannians because of the nature of the differential geometric structure on X arising from VMRT. © 2023, The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.11Nsciescopu
Delivering C, B, and N Atoms into Liquid Metals in Which They Are Normally Insoluble
[No abstract available]11Nsciescopu
Dynamic magnetic phase transition induced by parametric magnon pumping
Uncovering pathways to optically drive magnetic order-disorder transitions on ultrashort timescales can lead to the realization of novel out-of-equilibrium quantum phenomena. A long-sought pathway is to directly excite a highly nonthermal energy-momentum distribution of magnons, bypassing both charge and lattice degrees of freedom. However, this remains elusive owing to the weak coupling and large momentum mismatch between photons and magnons. Here we demonstrate strong parametric excitation of magnons across the entire Brillouin zone of the antiferromagnetic insulator Sr2Cu3O4Cl2 by periodically modulating the superexchange interaction with the electric field of light. The excitation efficiency is greatly enhanced by tuning to the van Hove singularity in the magnon spectrum, sufficient to transiently collapse the antiferromagnetic state using a pulsed laser field of 109 V/m. The order parameter recovery timescale increases by over 1000 times as a function of excitation density, reflecting a crossover from high- to low-energy magnon dominated decay dynamics. This electric-field induced parametric magnon pumping mechanism is applicable to a broad range of magnetic insulators and opens up the possibility of dynamically engineering magnon distributions by design. © 2024 American Physical Society.11Nsci
Changes in the global hospitalisation burden of respiratory syncytial virus in young children during the COVID-19 pandemic: a systematic analysis
Background: The COVID-19 pandemic is reported to have affected the epidemiology of respiratory syncytial virus (RSV), which could have important implications for RSV prevention and control strategies. We aimed to assess the hospitalisation burden of RSV-associated acute lower respiratory infection (ALRI) in children younger than 5 years during the pandemic period and the possible changes in RSV epidemiology from a global perspective. Methods: We conducted a systematic literature search for studies published between Jan 1, 2020, and June 30, 2022, in MEDLINE, Embase, Global Health, Web of Science, the WHO COVID-19 Research Database, CINAHL, LILACS, OpenGrey, CNKI, WanFang, and CqVip. We included unpublished data on RSV epidemiology shared by international collaborators. Eligible studies reported data on at least one of the following measures for children (aged <5 years) hospitalised with RSV-associated ALRI: hospital admission rates, in-hospital case fatality ratio, and the proportion of hospitalised children requiring supplemental oxygen or requiring mechanical ventilation or admission to intensive care. We used a generalised linear mixed-effects model for data synthesis to measure the changes in the incidence, age distribution, and disease severity of children hospitalised with RSV-associated ALRI during the pandemic, compared with the year 2019. Findings: We included 61 studies from 19 countries, of which 14 (23%) studies were from the published literature (4052 identified records) and 47 (77%) were from unpublished datasets. Most (51 [84%]) studies were from high-income countries; nine (15%) were from upper-middle-income countries, one (2%) was from a lower-middle-income country (Kenya), and none were from a low-income country. 15 studies contributed to the estimates of hospitalisation rate and 57 studies contributed to the severity analyses. Compared with 2019, the rates of RSV-associated ALRI hospitalisation in all children (aged 0–60 months) in 2020 decreased by 79·7% (325 000 cases vs 66 000 cases) in high-income countries, 13·8% (581 000 cases vs 501 000 cases) in upper-middle-income countries, and 42·3% (1 378 000 cases vs 795 000 cases) in Kenya. In high-income countries, annualised rates started to rise in 2021, and by March, 2022, had returned to a level similar to 2019 (6·0 cases per 1000 children [95% uncertainty interval 5·4–6·8] in April, 2021, to March, 2022, vs 5·0 cases per 1000 children [3·6–6·8] in 2019). By contrast, in middle-income countries, rates remained lower in the latest period with data available than in 2019 (for upper-middle-income countries, 2·1 cases [0·7–6·1] in April, 2021, to March, 2022, vs 3·4 [1·2–9·7] in 2019; for Kenya, 2·2 cases [1·8–2·7] in 2021 vs 4·1 [3·5–4·7] in 2019). Across all time periods and income regions, hospitalisation rates peaked in younger infants (aged 0 to <3 months) and decreased with increasing age. A significantly higher proportion of children aged 12–24 months were hospitalised with RSV-associated ALRI in high-income and upper-middle-income countries during the pandemic years than in 2019, with odds ratios ranging from 1·30 (95% uncertainty interval 1·07–1·59) to 2·05 (1·66–2·54). No consistent changes in disease severity were observed. Interpretation: The hospitalisation burden of RSV-associated ALRI in children younger than 5 years was significantly reduced during the first year of the COVID-19 pandemic. The rebound in hospitalisation rates to pre-pandemic rates observed in the high-income region but not in the middle-income region by March, 2022, suggests a persistent negative impact of the pandemic on health-care systems and health-care access in the middle-income region. RSV surveillance needs to be established (or re-established) to monitor changes in RSV epidemiology, particularly in low-income and lower-middle-income countries. Funding: EU Innovative Medicines Initiative Preparing for RSV Immunisation and Surveillance in Europe (PROMISE), Bill & Melinda Gates Foundation, and WHO. © 2023 World Health Organization11Nsciescopu
IL-15 in T-Cell Responses and Immunopathogenesis
IL-15 belongs to the common gamma chain cytokine family and has pleiotropic immunological functions. IL-15 is a homeostatic cytokine essential for the development and maintenance of NK cells and memory CD8+ T cells. In addition, IL-15 plays a critical role in the activation, effector functions, tissue residency, and senescence of CD8+ T cells. IL-15 also activates virtual memory T cells, mucosal-associated invariant T cells and γδ T cells. Recently, IL-15 has been highlighted as a major trigger of TCR-independent activation of T cells. This mechanism is involved in T cell-mediated immunopathogenesis in diverse diseases, including viral infections and chronic inflammatory diseases. Deeper understanding of IL-15-mediated T-cell responses and their underlying mechanisms could optimize therapeutic strategies to ameliorate host injury by T cell-mediated immunopathogenesis. This review highlights recent advancements in comprehending the role of IL-15 in relation to T cell responses and immunopathogenesis under various host conditions. © 2024. The Korean Association of Immunologists.11Nsciescopuskc
Convergence of the DDA for ensembles of objects of irregular shape
The discrete dipole approximation (DDA) is commonly used to compute light-scattering properties of irregularly shaped particles. The DDA maps the particle into an array of cubic cells with side d < λ. For a randomly oriented irregularly shaped particle, DDA has been shown accurate when kd|m| ≤ 1, where k is the wavenumber and m is the particle refractive index. We demonstrate that the DDA yields robust results even when kd|m| ≈ 1.2 when applied to ensembles of irregularly shaped dielectric particles and kd|m| ≈ 1.3 for conductive particles. This finding can greatly reduce the computational load required for performing such computations. © 2023 Elsevier Ltd11Nsciescopu